RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 LOC100289279A0A1B0GTE1 492 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 A6NLC8 198 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 ANXA2P2A6NMY6 339 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 VWC2LB2RUY7 222 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 GMDSO60547 372 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MTRF1O75570 445 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CST4P01036 141 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 ATP6V1B1P15313 513 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 TNFRSF1AP19438 455 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 EEF1B2P24534 225 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 GIFP27352 417 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 THBS2P35442 1172 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CRYBB2P43320 205 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MAP2K4P45985 399 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 WNT4P56705 351 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 DSCR9P59020 149 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MRPS11P82912 194 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MRPL28Q13084 256 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 RIN1Q13671 783 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 IRF3Q14653 427 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 HFEQ30201 348 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 RBM48Q5RL73 367 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 Q6ZSR3 168 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 NANOGP1Q8N7R0 232 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 OR13C3Q8NGS6 347 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 OR13C5Q8NGS8 318 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 RPS4Y2Q8TD47 263 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 NPRL2Q8WTW4 380 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CCL17Q92583 94 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 OR5M11Q96RB7 305 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MND1Q9BWT6 205 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CDCA4Q9BXL8 241 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CCDC90BQ9GZT6 254 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 GCM1Q9NP62 436 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 DLL4Q9NR61 685 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 BLOC1S6Q9UL45 172 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 PPP1R3CQ9UQK1 317 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 ERGIC3Q9Y282 383 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 LSM2Q9Y333 95 aaKnown RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 NSD1Q96L73 2696 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 IGHV4-61A0A0C4DH41 118 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 ANKRD61A6NGH8 418 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM212A6NML5 194 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 DHRS7CA6NNS2 312 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 CLDN25C9JDP6 229 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 NDUFS8O00217 210 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 WNT9BO14905 357 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 CYB5R3P00387 301 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 ISG15P05161 165 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 GRPP07492 148 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 SLC25A16P16260 332 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 PMELP40967 661 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 NR4A2P43354 598 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 GATA4P43694 442 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 GPR6P46095 362 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 GPM6AP51674 278 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 GABARAPL2P60520 117 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 SLC3A1Q07837 685 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 ZBTB37Q5TC79 503 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM244Q5VVB8 128 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM42Q69YG0 159 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 RPL22L1Q6P5R6 122 aaKnown RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF826PQ6ZT77 177 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 KCTD8Q6ZWB6 473 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 MOB3CQ70IA8 216 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 CELF2-AS1Q8N7Q2 184 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TRMT10AQ8TBZ6 339 aaKnown RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TSEN15Q8WW01 171 aaKnown RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 OR5P3Q8WZ94 311 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 SMIM19Q96E16 107 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 ADAT3Q96EY9 351 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-210ENST00000488228 COX4I2Q96KJ9 171 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 MICU1Q9BPX6 476 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 RTL8AQ9BWD3 113 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 COMMD4Q9H0A8 199 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 TMEM106BQ9NUM4 274 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 C14orf119Q9NWQ9 140 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 C1orf123Q9NWV4 160 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 BABAM2Q9NXR7 383 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 HHLA2Q9UM44 414 aa9.32□□□□□ -0.92
UBE4B-210ENST00000488228 hCG_1807616A0A1W2PRN6 198 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 ISPDA4D126 451 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 LRP5LA4QPB2 252 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF205O95201 554 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 PTBP3O95758 552 aaKnown RBP9.31□□□□□ -0.92
UBE4B-210ENST00000488228 NRASP01111 189 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF20P17024 532 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 CDH15P55291 814 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 ZNF154Q13106 437 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 MED22Q15528 200 aa9.31□□□□□ -0.92
UBE4B-210ENST00000488228 CCDC58Q4VC31 144 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms