RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 FAM98BQ52LJ0 330 aaKnown RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 LRRC10Q5BKY1 277 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 ASPHD2Q6ICH7 369 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 GDPGP1Q6ZNW5 385 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 ARHGAP24Q8N264 748 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 FTMTQ8N4E7 242 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 ITPKCQ96DU7 683 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 AMELYQ99218 206 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 FEVQ99581 238 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 PAPOLGQ9BWT3 736 aaKnown RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 OR51V1Q9H2C8 321 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 VNN3Q9NY84 501 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 DNAJC27Q9NZQ0 273 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 PRPF19Q9UMS4 504 aaKnown RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 CAB39Q9Y376 341 aaPredicted RBP12.6□□□□□ -0.39
TRIM50-203ENST00000488217 MPC1Q9Y5U8 109 aa12.6□□□□□ -0.39
TRIM50-203ENST00000488217 CST4P01036 141 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 CALB2P22676 271 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 EEF1B2P24534 225 aaKnown RBP12.59□□□□□ -0.39
TRIM50-203ENST00000488217 IKZF1Q13422 519 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 GFOD2Q3B7J2 385 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 FAM76BQ5HYJ3 339 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 TIGD4Q8IY51 512 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 FAM216BQ8N7L0 139 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 OR10G2Q8NGC3 310 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 OR10Z1Q8NGY1 313 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 OR5P3Q8WZ94 311 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 MED30Q96HR3 178 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 RNF170Q96K19 258 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 NIPSNAP1Q9BPW8 284 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 DNTTIP1Q9H147 329 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 MMP27Q9H306 513 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
TRIM50-203ENST00000488217 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.59□□□□□ -0.39
TRIM50-203ENST00000488217 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 H3BN98 237 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 FBP1P09467 338 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 PROK1P58294 105 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 GMFBP60983 142 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 TAF9Q16594 264 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 LCN8Q6JVE9 175 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 IQCF1Q8N6M8 205 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 Q8N7P7 452 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 TEX47Q8TBZ9 253 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 GIPC3Q8TF64 312 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 LRTOMTQ8WZ04 291 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 PIGCQ92535 297 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
TRIM50-203ENST00000488217 RAB3IPQ96QF0 476 aaPredicted RBP12.58□□□□□ -0.4
TRIM50-203ENST00000488217 HIST1H2AAQ96QV6 131 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 RBM4BQ9BQ04 359 aaKnown RBP12.58□□□□□ -0.4
TRIM50-203ENST00000488217 RTL8AQ9BWD3 113 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 CHID1Q9BWS9 393 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 WDR13Q9H1Z4 485 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 C16orf95Q9H693 158 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 SIRT7Q9NRC8 400 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 SNTG1Q9NSN8 517 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 DNAJB11Q9UBS4 358 aa12.58□□□□□ -0.4
TRIM50-203ENST00000488217 TMEM210A6NLX4 147 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 RNASEK-C17orf49H0YIS7 233 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 NPFFO15130 113 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 LYNP07948 512 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
TRIM50-203ENST00000488217 PRDX4Q13162 271 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 GK3PQ14409 553 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 GINS1Q14691 196 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 STUMQ69YW2 141 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 PLBD1Q6P4A8 553 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 ZNF788Q6ZQV5 615 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 Q6ZSV7 163 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 KCTD8Q6ZWB6 473 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 C8orf46Q8TAG6 207 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 H1FXQ92522 213 aaKnown RBP12.57□□□□□ -0.4
TRIM50-203ENST00000488217 TCF7L1Q9HCS4 588 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 ABCB9Q9NP78 766 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 ZNF391Q9UJN7 358 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 VWFP04275 2813 aa12.57□□□□□ -0.4
TRIM50-203ENST00000488217 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 BTBD17A6NE02 478 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 PRR23D1E9PI22 279 aaPredicted RBP12.56□□□□□ -0.4
TRIM50-203ENST00000488217 AKR7A2O43488 359 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 TSPAN9O75954 239 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 HMGN1P05114 100 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 ACAA1P09110 424 aaPredicted RBP12.56□□□□□ -0.4
TRIM50-203ENST00000488217 PRR23D2P0DMB1 279 aaPredicted RBP12.56□□□□□ -0.4
TRIM50-203ENST00000488217 RAP2AP10114 183 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 ACKR3P25106 362 aa12.56□□□□□ -0.4
TRIM50-203ENST00000488217 POU1F1P28069 291 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms