RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CAB39Q9Y376 341 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 ANK3Q12955 4377 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 TEP1Q99973 2627 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 MED13LQ71F56 2210 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 CR1P17927 2039 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF816-ZNF321PA0A0X1KG74 233 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 GMDSO60547 372 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 LY6G6DO95868 133 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 CSF3P09919 207 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 SLC25A16P16260 332 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 MYL12AP19105 171 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 USF1P22415 310 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 CD80P33681 288 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 GNALP38405 381 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 MAP2K4P45985 399 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 HSPA13P48723 471 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 SRP9P49458 86 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 GBX2P52951 348 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 SLC35A2P78381 396 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 MRPS11P82912 194 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 Q6ZSR3 168 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 OR8S1Q8NH09 359 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 CLDND2Q8NHS1 167 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 ORAI1Q96D31 301 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 MYOZ1Q9NP98 299 aaPredicted RBP14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 BABAM2Q9NXR7 383 aa14.43□□□□□ -0.1
SHROOM1-205ENST00000488072 IRGMA1A4Y4 181 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 ANKRD61A6NGH8 418 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM178BH3BS89 294 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 TFF1P04155 84 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 TNFRSF1AP19438 455 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 CRHBPP24387 322 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 GPM6AP51674 278 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 GMFBP60983 142 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 ZMYND11Q15326 602 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 PLCXD3Q63HM9 321 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 KCTD8Q6ZWB6 473 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 ZDHHC23Q8IYP9 409 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 BATF2Q8N1L9 274 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF676Q8N7Q3 588 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 NANOGP1Q8N7R0 232 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 OR1M1Q8NGA1 313 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 TRMT10AQ8TBZ6 339 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 FGGYQ96C11 551 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 RNF170Q96K19 258 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 DUSP21Q9H596 190 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 ENPP5Q9UJA9 477 aa14.42□□□□□ -0.1
SHROOM1-205ENST00000488072 IGHV3OR15-7A0A075B7D8 119 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 TRBV2A0A0J9YWF9 115 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 ISPDA4D126 451 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 A6NLC8 198 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF732B4DXR9 585 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 CLDN25C9JDP6 229 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 NDUFS8O00217 210 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 CDIPTO14735 213 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 DENRO43583 198 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 PTBP3O95758 552 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 GATA4P43694 442 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 SOX2P48431 317 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 CCR9P51686 369 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM33P57088 247 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 SLC3A1Q07837 685 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 LOXL1Q08397 574 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF154Q13106 437 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 IRF3Q14653 427 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 CDK5R1Q15078 307 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 UBE2V2Q15819 145 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM42Q69YG0 159 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 SFRP4Q6FHJ7 346 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 TMPRSS11AQ6ZMR5 421 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 DEFB108BQ8NET1 73 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 NKX3-1Q99801 234 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 SLC22A4Q9H015 551 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF391Q9UJN7 358 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 LSM2Q9Y333 95 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 NPTNQ9Y639 398 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 DYSFO75923 2080 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 CSPG4Q6UVK1 2322 aa14.41□□□□□ -0.1
SHROOM1-205ENST00000488072 IGKV1-9A0A0C4DH69 117 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 FAM157AC9JC47 383 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 OGG1O15527 345 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 RHBDL1O75783 438 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 NRASP01111 189 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 IGHV2-70P01814 119 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 UBCP0CG48 685 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 IGHV4-31P0DP07 118 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 TGM4P49221 684 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 CDH15P55291 814 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 LMO4P61968 165 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM249Q2WGJ8 235 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM244Q5VVB8 128 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 ASPHD2Q6ICH7 369 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 KRT74Q7RTS7 529 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 OR52N1Q8NH53 320 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 RPS4Y2Q8TD47 263 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 MRPL48Q96GC5 212 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 ZNF488Q96MN9 340 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 MICU1Q9BPX6 476 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 LPAR2Q9HBW0 351 aa14.4□□□□□ -0.1
SHROOM1-205ENST00000488072 CHCHD3Q9NX63 227 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms