RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GFRALQ6UXV0 394 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 OR52I2Q8NH67 350 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 NPRL2Q8WTW4 380 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 PIGTQ969N2 578 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 ZC3HAV1LQ96H79 300 aaKnown RBP8.15□□□□□ -1.11
SF3B1-211ENST00000487698 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 OBP2BQ9NPH6 170 aa8.15□□□□□ -1.11
SF3B1-211ENST00000487698 RBFOX1Q9NWB1 397 aaKnown RBP8.15□□□□□ -1.11
SF3B1-211ENST00000487698 IGKV1-27A0A075B6S5 117 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MEIOCA2RUB1 952 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 FUOMA2VDF0 154 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 RAB27BO00194 218 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 ORC5O43913 435 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 NRASP01111 189 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PTHLHP12272 177 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PRKACBP22694 351 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 HOXC12P31275 282 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PTGFRP43088 359 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 INPP1P49441 399 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 IDH3GP51553 393 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 ZP1P60852 638 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 KLF9Q13886 244 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 HLXQ14774 488 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MOGAT2Q3SYC2 334 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 ZNF57Q68EA5 555 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MTFR2Q6P444 385 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 BHLHA15Q7RTS1 189 aaPredicted RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PNLDC1Q8NA58 520 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 OR56B2PQ8NGI1 322 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 TECTBQ96PL2 329 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 GPER1Q99527 375 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MYEF2Q9P2K5 600 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 GHRLQ9UBU3 117 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 KCNN3Q9UGI6 736 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 TRAV18A0A075B6X5 111 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 WIPF3A6NGB9 483 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 OR5H1A6NKK0 313 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 SMPD2O60906 423 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 IGLV1-44P01699 117 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 BTCP35070 178 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 GDNFP39905 211 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 KIR2DL3P43628 341 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 SRP9P49458 86 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 BCAP31P51572 246 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 GPR176Q14439 515 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 RAB12Q6IQ22 244 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MZT2BQ6NZ67 158 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 MRPL21Q7Z2W9 205 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 C1QL2Q7Z5L3 287 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 TOMM5Q8N4H5 51 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 TMEM104Q8NE00 496 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 KCNG3Q8TAE7 436 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 FCAMRQ8WWV6 532 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 FAM46BQ96A09 425 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PHF21AQ96BD5 680 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 WBP1Q96G27 269 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 NUDT16L1Q9BRJ7 211 aaKnown RBP8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PRORYQ9H606 182 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 PTTG3PQ9NZH4 202 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 CRIM1Q9NZV1 1036 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 TINAGQ9UJW2 476 aa8.14□□□□□ -1.11
SF3B1-211ENST00000487698 POLEQ07864 2286 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 ITPR1Q14643 2758 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 PCNX1Q96RV3 2341 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 METTL21EPA6NDL7 271 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 MSTNO14793 375 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CDC14BO60729 498 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CST4P01036 141 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 SLC6A1P30531 599 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 RBP2P50120 134 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 KLRB1Q12918 225 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 DYRK1AQ13627 763 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 LHFPL2Q6ZUX7 228 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CDH24Q86UP0 819 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CELF2-AS1Q8N7Q2 184 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 FAM169BQ8N8A8 192 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 ACBD4Q8NC06 268 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 DUSP18Q8NEJ0 188 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CSNK2A3Q8NEV1 391 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 OR5D18Q8NGL1 313 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 OR5L1Q8NGL2 311 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 TNFAIP8L1Q8WVP5 186 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CPNE2Q96FN4 548 aaPredicted RBP8.13□□□□□ -1.11
SF3B1-211ENST00000487698 LPAR5Q9H1C0 372 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 NEK6Q9HC98 313 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 KLK11Q9UBX7 282 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 AMDHD2Q9Y303 409 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 SLC25A15Q9Y619 301 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 CACNG2Q9Y698 323 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
SF3B1-211ENST00000487698 HEATR1Q9H583 2144 aaKnown RBP8.13□□□□□ -1.11
SF3B1-211ENST00000487698 A0A0A6YYD4 124 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 A0A0G2JNJ9 132 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 ANKRD20A5PA0PJZ0 165 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 H7C417 338 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 SCGNO76038 276 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 AGFG2O95081 481 aa8.12□□□□□ -1.11
SF3B1-211ENST00000487698 PSMB1P20618 241 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms