RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CLIP4Q8N3C7 705 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 CADM2Q8N3J6 435 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 MFSD4AQ8N468 514 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 BEND2Q8NDZ0 799 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 S100ZQ8WXG8 99 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 NSMAFQ92636 917 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 RPL3LQ92901 407 aaKnown RBP9.48□□□□□ -0.89
TRIM56-204ENST00000487252 LGALS12Q96DT0 336 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 DDOQ99489 341 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 NXF2Q9GZY0 626 aaKnown RBP9.48□□□□□ -0.89
TRIM56-204ENST00000487252 RAB18Q9NP72 206 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 C20orf141Q9NUB4 165 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 TBC1D23Q9NUY8 699 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 GLTPQ9NZD2 209 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 SLC13A4Q9UKG4 626 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF232Q9UNY5 417 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 RPL36Q9Y3U8 105 aaKnown RBP9.48□□□□□ -0.89
TRIM56-204ENST00000487252 KPTNQ9Y664 436 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 A0A087WUJ7 227 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 C5orf49A4QMS7 147 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF726A6NNF4 738 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 EFCAB9A8MZ26 197 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 NPFFO15130 113 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 AIREO43918 545 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 PRKYO43930 277 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 FMO6PO60774 539 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 FCN3O75636 299 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 JTBO76095 146 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 LYPD3O95274 346 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 SOX14O95416 240 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 PF4P02776 101 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 THY1P04216 161 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 DBIP07108 87 aaKnown RBP9.47□□□□□ -0.89
TRIM56-204ENST00000487252 PRG2P13727 222 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 CCNOP22674 350 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 GADD45AP24522 165 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 FPR3P25089 353 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 GRK5P34947 590 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 OPRL1P41146 370 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 RGS6P49758 472 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 TAS2R41P59536 307 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 VBP1P61758 197 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 COPZ1P61923 177 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 NCS1P62166 190 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF91Q05481 1191 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 CDONQ4KMG0 1287 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 PABPC1L2AQ5JQF8 200 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 KRT77Q7Z794 578 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 PEX5LQ8IYB4 626 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 CLDN22Q8N7P3 220 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 ABHD4Q8TB40 342 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 ACOT11Q8WXI4 607 aaPredicted RBP9.47□□□□□ -0.89
TRIM56-204ENST00000487252 TMEM80Q96HE8 168 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 IL4I1Q96RQ9 567 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 MCHR1Q99705 422 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
TRIM56-204ENST00000487252 SMURF1Q9HCE7 757 aa9.47□□□□□ -0.89
TRIM56-204ENST00000487252 CCDC59Q9P031 241 aaKnown RBP9.47□□□□□ -0.89
TRIM56-204ENST00000487252 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
TRIM56-204ENST00000487252 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 H3BN98 237 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 DBTP11182 482 aaKnown RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 IFNA8P32881 189 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 PMELP40967 661 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 RGS8P57771 180 aaPredicted RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 DGCR2P98153 550 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 ANKDD1AQ495B1 522 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 C5orf46Q6UWT4 87 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 ZNF730Q6ZMV8 503 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 MBOAT2Q6ZWT7 520 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 PXKQ7Z7A4 578 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 NANOGP1Q8N7R0 232 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 TCEANCQ8N8B7 351 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 TMEM163Q8TC26 289 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 MEGF10Q96KG7 1140 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 ZNF582Q96NG8 517 aaPredicted RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 OPALINQ96PE5 141 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 TECTBQ96PL2 329 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 SSX3Q99909 188 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 TSSK6Q9BXA6 273 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 FGF20Q9NP95 211 aaPredicted RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 TBCCD1Q9NVR7 557 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 DNAJC27Q9NZQ0 273 aa9.46□□□□□ -0.9
TRIM56-204ENST00000487252 DIMT1Q9UNQ2 313 aaKnown RBP9.46□□□□□ -0.9
TRIM56-204ENST00000487252 ALMS1Q8TCU4 4167 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 IGKV1D-42A0A075B6H8 117 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 IRGMA1A4Y4 181 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 TRAPPC13A5PLN9 417 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 METTL15A6NJ78 407 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
TRIM56-204ENST00000487252 RAMP3O60896 148 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 SULT1C4O75897 302 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 SCG5P05408 212 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 SAA4P35542 130 aa9.45□□□□□ -0.9
TRIM56-204ENST00000487252 LSM3P62310 102 aaKnown RBP9.45□□□□□ -0.9
TRIM56-204ENST00000487252 GUCA2AQ02747 115 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms