RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 EFSO43281 561 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 TK1P04183 234 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 SERPINA7P05543 415 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 TPOP07202 933 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PPP3CBP16298 524 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 SSPNQ14714 243 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FBXL14Q8N1E6 418 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 OR1F12Q8NHA8 337 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 STOML3Q8TAV4 291 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 TMPRSS13Q9BYE2 586 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 MCRIP1C9JLW8 97 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 SLC34A2O95436 690 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 UBBP0CG47 229 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 PLA2G7Q13093 441 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 RGP1Q92546 391 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-216ENST00000486741 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 DLL4Q9NR61 685 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 ST3GAL6Q9Y274 331 aa11.71□□□□□ -0.53
HMGN1-216ENST00000486741 K7ESF4 209 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 TXNDC12O95881 172 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 SERPINE2P07093 398 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF728P0DKX0 622 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 HAAOP46952 286 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 RRADP55042 308 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 ECH1Q13011 328 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.54
HMGN1-216ENST00000486741 CD300LFQ8TDQ1 290 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 RNF133Q8WVZ7 376 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 NMNAT2Q9BZQ4 307 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 TTRP02766 147 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 DEFB109BQ30KR1 87 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 SLC38A6Q8IZM9 456 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.71□□□□□ -0.54
HMGN1-216ENST00000486741 PCNX1Q96RV3 2341 aa11.71□□□□□ -0.54
HMGN1-216ENST00000486741 BORCS7-ASMTA0A0B4J1R7 106 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 LOC101059948A0A1B0GTJ6 334 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 OR8U9P0C7N5 309 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 LIFP15018 202 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 ADH6P28332 368 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 GCH1P30793 250 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 TGIF1Q15583 401 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PPP1R1CQ8WVI7 109 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 RRNAD1Q96FB5 475 aaKnown RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 EIF5A2Q9GZV4 153 aaKnown RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 KLF13Q9Y2Y9 288 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PTGFRP43088 359 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 MAGEA5P43359 124 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 GABRA4P48169 554 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 SELENOVP59797 346 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 RAB1AP62820 205 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 CMTM1Q8IZ96 169 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 CLCC1Q96S66 551 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 SRD5A2P31213 254 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 MOGAT2Q3SYC2 334 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 TRIB1Q96RU8 372 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 FAAP24Q9BTP7 215 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 PRMT8Q9NR22 394 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-216ENST00000486741 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
HMGN1-216ENST00000486741 RAC3P60763 192 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 SP6Q3SY56 376 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 OIT3Q8WWZ8 545 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 CPNE4Q96A23 557 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-216ENST00000486741 BCO1Q9HAY6 547 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 TXNL1O43396 289 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 SSX5O60225 188 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 AQP8O94778 261 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF14P17017 642 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-216ENST00000486741 KLK2P20151 261 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 DHRS2Q13268 280 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 CCDC71LQ8N9Z2 235 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 KCNIP1Q9NZI2 227 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 TRAPPC2LQ9UL33 140 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 CSAG2Q9Y5P2 127 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 SPAARA0A1B0GVQ0 90 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 OR5H8P0DN80 308 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 MMP16P51512 607 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 SEH1LQ96EE3 360 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 TGIF2Q9GZN2 237 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 DNAJB11Q9UBS4 358 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 ZNF407Q9C0G0 2248 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 SNRPGP15A8MWD9 76 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 VSIG8P0DPA2 414 aa11.69□□□□□ -0.54
HMGN1-216ENST00000486741 PLAURQ03405 335 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms