RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 FAM157CP0CG43 387 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 RPS2P15880 293 aaKnown RBP15.25■□□□□ 0.03
COL1A1-207ENST00000486572 FAHP16930 419 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 CPT2P23786 658 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 ACTA2P62736 377 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 ACTG2P63267 376 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 CSNK2BP67870 215 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 RAB40BQ12829 278 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 ZNF691Q5VV52 312 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 KCTD20Q7Z5Y7 419 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 HPSE2Q8WWQ2 592 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 HIST1H2AAQ96QV6 131 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 TMEM246Q9BRR3 403 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 TLNRD1Q9H1K6 362 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 AMBNQ9NP70 447 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 ENPP5Q9UJA9 477 aa15.25■□□□□ 0.03
COL1A1-207ENST00000486572 RPL36Q9Y3U8 105 aaKnown RBP15.25■□□□□ 0.03
COL1A1-207ENST00000486572 JMJD1CQ15652 2540 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 A0A1B0GTI1 187 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 FOXH1O75593 365 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 CLIC3O95833 236 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 CCL1P22362 96 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 CD80P33681 288 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 THBS2P35442 1172 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 SEC61A1P61619 476 aaKnown RBP15.24■□□□□ 0.03
COL1A1-207ENST00000486572 LCN2P80188 198 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 HOXA4Q00056 320 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-207ENST00000486572 KRTAP21-3Q3LHN1 58 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 ESCO2Q56NI9 601 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 KCTD8Q6ZWB6 473 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 DOK3Q7L591 496 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 C11orf53Q8IXP5 236 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 DHRSXQ8N5I4 330 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 GCSAMQ8N6F7 178 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 BOLLQ8N9W6 283 aaKnown RBP15.24■□□□□ 0.03
COL1A1-207ENST00000486572 SETD9Q8NE22 299 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 C19orf18Q8NEA5 215 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
COL1A1-207ENST00000486572 RNF170Q96K19 258 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
COL1A1-207ENST00000486572 VCXQ9H320 206 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 RNPEPL1Q9HAU8 725 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 TRIM36Q9NQ86 728 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 MIOXQ9UGB7 285 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 LRCH1Q9Y2L9 728 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 V9GYS6 101 aa15.24■□□□□ 0.03
COL1A1-207ENST00000486572 A0A0G2JMP0 313 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 A0A0X1KG70 313 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 A0A1B0GVI7 797 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 DHRS7CA6NNS2 312 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 A8MXK9 166 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 LGALS8O00214 317 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 WBP4O75554 376 aaKnown RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 IGHA1P01876 353 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 WNT2P09544 360 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 SRD5A1P18405 259 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 PSMB10P40306 273 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 ADARB1P78563 741 aaKnown RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 KCNJ8Q15842 424 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 ODF4Q2M2E3 257 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 CEACAM21Q3KPI0 293 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 CEP78Q5JTW2 689 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 FAHD2BQ6P2I3 314 aaPredicted RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 WDR82Q6UXN9 313 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 DCDC5Q6ZRR9 648 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 Q6ZSR3 168 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 PRIMA1Q86XR5 153 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 PRSS35Q8N3Z0 413 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 DEFB108BQ8NET1 73 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 OR4M2Q8NGB6 313 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 OR14K1Q8NGZ2 314 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 LRRC29Q8WV35 223 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 NEIL1Q96FI4 390 aaPredicted RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 FAHD2AQ96GK7 314 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 ADI1Q9BV57 179 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 ALG8Q9BVK2 526 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 FGF23Q9GZV9 251 aaPredicted RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 INPP5EQ9NRR6 644 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 MRPS18AQ9NVS2 196 aaKnown RBP15.23■□□□□ 0.03
COL1A1-207ENST00000486572 MYRFQ9Y2G1 1151 aa15.23■□□□□ 0.03
COL1A1-207ENST00000486572 OOEPA6NGQ2 149 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 C3orf80F5H4A9 247 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 CDIPTO14735 213 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 LHBP01229 141 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 UBCP0CG48 685 aaKnown RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 GATA3P23771 443 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 ZFP36P26651 326 aaKnown RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 GPM6AP51674 278 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 OR12D2P58182 307 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 SLC34A1Q06495 639 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 IL18R1Q13478 541 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 GALEQ14376 348 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 SMN1Q16637 294 aaKnown RBP15.22■□□□□ 0.03
COL1A1-207ENST00000486572 KLHL22Q53GT1 634 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 FAM76BQ5HYJ3 339 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 DCAF12L2Q5VW00 463 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 PLCXD3Q63HM9 321 aa15.22■□□□□ 0.03
COL1A1-207ENST00000486572 SFRP4Q6FHJ7 346 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms