RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CATSPERDQ86XM0 798 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 PRSS35Q8N3Z0 413 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 EIF4E3Q8N5X7 224 aaKnown RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF441Q8N8Z8 693 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ZDHHC22Q8N966 263 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 OR10H5Q8NGA6 315 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 OR13C3Q8NGS6 347 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 FAM46BQ96A09 425 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ADIPOR1Q96A54 375 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 KTI12Q96EK9 354 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 PHYHIPLQ96FC7 376 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 FAHD2AQ96GK7 314 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ADOQ96SZ5 270 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 FXYD6Q9H0Q3 95 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 NARFLQ9H6Q4 476 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 PROK2Q9HC23 129 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 SPRR3Q9UBC9 169 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 KCNG2Q9UJ96 466 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 RAB22AQ9UL26 194 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TMED7Q9Y3B3 224 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 SPG11Q96JI7 2443 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM272A0A1B0GTI8 110 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 PRR32B1ATL7 298 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 C11orf98E9PRG8 122 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 G3V3Q6 166 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 TSPAN2O60636 221 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC16A7O60669 478 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 HRGP04196 525 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 GLI4P10075 376 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF35P13682 527 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CXCL2P19875 107 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 MSX1P28360 303 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 UBE2MP61081 183 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SRSF4Q08170 494 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ACKR1Q16570 336 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM255AQ5JRV8 349 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 C1orf100Q5SVJ3 147 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 OR5M10Q6IEU7 315 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 FAM166AQ6J272 317 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF627Q7L945 461 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC25A36Q96CQ1 311 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ORAI1Q96D31 301 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 C14orf79Q96F83 325 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC25A44Q96H78 314 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 GNRHR2Q96P88 292 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 TSSK2Q96PF2 358 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SCGB3A2Q96PL1 93 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 UQCC2Q9BRT2 126 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 MFFQ9GZY8 342 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 DNTTIP1Q9H147 329 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 METTL7AQ9H8H3 244 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ACKR4Q9NPB9 350 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC2A8Q9NY64 477 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ARHGAP21Q5T5U3 1957 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ANKHD1Q8IWZ3 2542 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 HEATR5AQ86XA9 2040 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 IGLV1-36A0A0B4J1U3 117 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 A0A0G2JNJ9 132 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CIB4A0PJX0 185 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC22A23A1A5C7 686 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 MFSD2BA6NFX1 497 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 H7C1C5 153 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 BPNT1O95861 308 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CD74P04233 296 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 AMY2AP04746 511 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 VSIG10L2P0DP72 767 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CD37P11049 281 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SLC25A4P12235 298 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 IGFBP3P17936 291 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CD34P28906 385 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 APOBEC1P41238 236 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 LCN6P62502 163 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CYCSP99999 105 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 TFF3Q07654 80 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 RNASE10Q5GAN6 216 aaKnown RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 RTL6Q6ICC9 239 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CBLN3Q6UW01 205 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 OR51S1Q8NGJ8 323 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 OR1J4Q8NGS1 313 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 GCDHQ92947 438 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-208ENST00000486533 DDIT4LQ96D03 193 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 ANGPTL4Q9BY76 406 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 SDHAF3Q9NRP4 125 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 CA10Q9NS85 328 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 Q9UFV3 132 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 OR52A1Q9UKL2 312 aa7.93□□□□□ -1.14
COL12A1-208ENST00000486533 F8P00451 2351 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 MAP1AP78559 2803 aaPredicted RBP7.92□□□□□ -1.14
COL12A1-208ENST00000486533 LOC390937A0A1W2PQ73 354 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 NUDT19A8MXV4 375 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 PLPP3O14495 311 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF208O43345 1280 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 OIP5O43482 229 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 NPIPB7O75200 414 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 CD8AP01732 235 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 CD3DP04234 171 aa7.92□□□□□ -1.14
COL12A1-208ENST00000486533 ITGA5P08648 1049 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms