RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 RTTNQ86VV8 2226 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 UBE2QL1A1L167 161 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 GFRA3O60609 400 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 ZNF24P17028 368 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 MYO7BQ6PIF6 2116 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 IDO2Q6ZQW0 420 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 SPSB1Q96BD6 273 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 RAB3CQ96E17 227 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 BANF2Q9H503 90 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 ZNF552Q9H707 407 aaPredicted RBP17.75■□□□□ 0.43
HPS3-206ENST00000486530 LIPGQ9Y5X9 500 aa17.75■□□□□ 0.43
HPS3-206ENST00000486530 DISC1C4P0D8 188 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 ZNF735P0CB33 412 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 FCGR2AP12318 317 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 ACKR3P25106 362 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 ARF1P84077 181 aaKnown RBP17.74■□□□□ 0.43
HPS3-206ENST00000486530 RTP5Q14D33 572 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 ZMYND11Q15326 602 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 SLC22A6Q4U2R8 563 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 LAMTOR1Q6IAA8 161 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 PLXDC2Q6UX71 529 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 C9orf62Q8N4C0 152 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 BPIFB2Q8N4F0 458 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 TNFAIP8L1Q8WVP5 186 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 APH1AQ96BI3 265 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 CPNE2Q96FN4 548 aaPredicted RBP17.74■□□□□ 0.43
HPS3-206ENST00000486530 ALX4Q9H161 411 aaPredicted RBP17.74■□□□□ 0.43
HPS3-206ENST00000486530 SLC2A8Q9NY64 477 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 MGAT4CQ9UBM8 478 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 HSPB11Q9Y547 144 aa17.74■□□□□ 0.43
HPS3-206ENST00000486530 GSTT2P0CG29 244 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 HIST1H1DP16402 221 aaKnown RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 MPZP25189 248 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 GNG2P59768 71 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 RPS27AP62979 156 aaKnown RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 CNN3Q15417 329 aaKnown RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 RNASE10Q5GAN6 216 aaKnown RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 PABPC1L2AQ5JQF8 200 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 MCEMP1Q8IX19 187 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 OR5D18Q8NGL1 313 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 ZNF431Q8TF32 576 aaPredicted RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 CCDC107Q8WV48 283 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 S100A13Q99584 98 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 LDAHQ9H6V9 325 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 ARHGAP21Q5T5U3 1957 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 A0A1W2PP11 408 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 TBPP20226 339 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 PNLIPRP3Q17RR3 467 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 RSPO4Q2I0M5 234 aaPredicted RBP17.73■□□□□ 0.43
HPS3-206ENST00000486530 ZNF100Q8IYN0 542 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 STEAP2Q8NFT2 490 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 OR4S1Q8NGB4 309 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 PIGTQ969N2 578 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 PRRT1Q99946 306 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 MGAT4AQ9UM21 535 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 PLEKHA6Q9Y2H5 1048 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 FAM186AA6NE01 2351 aa17.73■□□□□ 0.43
HPS3-206ENST00000486530 TRGV5A0A0B4J1U4 118 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 SOCS1O15524 211 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 XRCC2O43543 280 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 SSX5O60225 188 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 PRKACBP22694 351 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 TNFSF10P50591 281 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 C3AR1Q16581 482 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 DMRTC1Q5HYR2 192 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 PLAC9Q5JTB6 97 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 NLRC3Q7RTR2 1065 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 FAM89BQ8N5H3 189 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 PRDM14Q9GZV8 571 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 DEFB127Q9H1M4 99 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 ZDHHC11Q9H8X9 412 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 GPR173Q9NS66 373 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 GVINP1Q7Z2Y8 2422 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 FREM1Q5H8C1 2179 aa17.72■□□□□ 0.43
HPS3-206ENST00000486530 TMEM82A0PJX8 343 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 GIPP09681 153 aaPredicted RBP17.71■□□□□ 0.43
HPS3-206ENST00000486530 MGMTP16455 207 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 DNASE1P24855 282 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 C1QL2Q7Z5L3 287 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 GVQW1Q8N7I0 195 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 OR51T1Q8NGJ9 327 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 OR52B4Q8NGK2 314 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 SLC6A7Q99884 636 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 MYOZ1Q9NP98 299 aaPredicted RBP17.71■□□□□ 0.43
HPS3-206ENST00000486530 ANAPC10Q9UM13 185 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 KCNK7Q9Y2U2 307 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 hCG_38984A0A1B0GV85 526 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 MFNGO00587 321 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 TMEM50BP56557 158 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 CLVS2Q5SYC1 327 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 OR2T35Q8NGX2 323 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 GRPEL2Q8TAA5 225 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 TM2D1Q9BX74 207 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 C1QTNF5Q9BXJ0 243 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 POFUT1Q9H488 388 aa17.71■□□□□ 0.43
HPS3-206ENST00000486530 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.71■□□□□ 0.43
HPS3-206ENST00000486530 OR14I1A6ND48 311 aa17.7■□□□□ 0.42
HPS3-206ENST00000486530 ZNF780AO75290 641 aaPredicted RBP17.7■□□□□ 0.42
HPS3-206ENST00000486530 SLC34A2O95436 690 aa17.7■□□□□ 0.42
HPS3-206ENST00000486530 CLN3Q13286 438 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms