RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FAM71F1Q96KD3 344 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-208ENST00000486404 LYZL4Q96KX0 146 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 PKP2Q99959 881 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 NUDT16L1Q9BRJ7 211 aaKnown RBP10.75□□□□□ -0.69
CHMP3-208ENST00000486404 RNPEPL1Q9HAU8 725 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 CLN6Q9NWW5 311 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 DNAJB11Q9UBS4 358 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 WARS2Q9UGM6 360 aaKnown RBP10.75□□□□□ -0.69
CHMP3-208ENST00000486404 NUP50Q9UKX7 468 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 NKX6-3A6NJ46 265 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 EBAG9O00559 213 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 TMPRSS2O15393 492 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 CST4P01036 141 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 KRT8P05787 483 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 DCTDP32321 178 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 PSMB10P40306 273 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 GMFBP60983 142 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 MFGE8Q08431 387 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-208ENST00000486404 WDR82Q6UXN9 313 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 FAM90A1Q86YD7 464 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 GALNT4Q8N4A0 578 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-208ENST00000486404 OR51E1Q8TCB6 317 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 ST8SIA4Q92187 359 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 RFKQ969G6 155 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 RNF170Q96K19 258 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 TBX5Q99593 518 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 MS4A7Q9GZW8 240 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-208ENST00000486404 GPR84Q9NQS5 396 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 CTSZQ9UBR2 303 aa10.74□□□□□ -0.69
CHMP3-208ENST00000486404 NUFIP1Q9UHK0 495 aaKnown RBP10.74□□□□□ -0.69
CHMP3-208ENST00000486404 IGHV3OR16-10A0A075B7F0 116 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PRR32B1ATL7 298 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 EI24O14681 340 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 CDIPTO14735 213 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 MTRF1O75570 445 aaKnown RBP10.73□□□□□ -0.69
CHMP3-208ENST00000486404 ATP6V1B1P15313 513 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 MUC1P15941 1255 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-208ENST00000486404 HTR1FP30939 366 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 GPM6AP51674 278 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PAX8Q06710 450 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 EGR3Q06889 387 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 RIPPLY1Q0D2K3 151 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PLCXD3Q63HM9 321 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 SLC36A1Q7Z2H8 476 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 FAM220AQ7Z4H9 259 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 YIPF7Q8N8F6 280 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 OR10H4Q8NGA5 316 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 OR8J1Q8NGP2 316 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 OR5P3Q8WZ94 311 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 RPL3LQ92901 407 aaKnown RBP10.73□□□□□ -0.69
CHMP3-208ENST00000486404 RAB3IPQ96QF0 476 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-208ENST00000486404 APOL4Q9BPW4 351 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 TLNRD1Q9H1K6 362 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PPP1R3EQ9H7J1 279 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PLEKHA1Q9HB21 404 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 ENPP5Q9UJA9 477 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 PIGLQ9Y2B2 252 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 R4GMQ9 66 aa10.73□□□□□ -0.69
CHMP3-208ENST00000486404 KIR2DS1A0A191URI9 304 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 C22orf46C9J442 243 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 DHRS3O75911 302 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 RPP14O95059 124 aaKnown RBP10.72□□□□□ -0.69
CHMP3-208ENST00000486404 APOL3O95236 402 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 PPIAL4GP0DN37 164 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 FAHP16930 419 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 FGF12P61328 243 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 GNG3P63215 75 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 PAX2Q02962 417 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 CEP78Q5JTW2 689 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 ZBTB37Q5TC79 503 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 METTL11BQ5VVY1 283 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 PLEKHG7Q6ZR37 379 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 PNLDC1Q8NA58 520 aaKnown RBP10.72□□□□□ -0.69
CHMP3-208ENST00000486404 OR10Z1Q8NGY1 313 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 HPSE2Q8WWQ2 592 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 ITFG2Q969R8 447 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 UPRTQ96BW1 309 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 C12orf43Q96C57 262 aaKnown RBP10.72□□□□□ -0.69
CHMP3-208ENST00000486404 SMURF1Q9HCE7 757 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF69Q9UC07 566 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 OR52A1Q9UKL2 312 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 SNX5Q9Y5X3 404 aa10.72□□□□□ -0.69
CHMP3-208ENST00000486404 OR5B21A6NL26 309 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 H3BNX3 289 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 DVL1O14640 695 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 MAGEB4O15481 346 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-208ENST00000486404 LHBP01229 141 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 ALPLP05186 524 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 POLR2IP36954 125 aaKnown RBP10.71□□□□□ -0.69
CHMP3-208ENST00000486404 MTNR1AP48039 350 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 ALDH3A2P51648 485 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 EFNB1P98172 346 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms