RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 Q6ZT83 130 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 SEM1Q6ZVN7 128 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 TOMM5Q8N4H5 51 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 CNEP1R1Q8N9A8 125 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 ENKURQ8TC29 256 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 ZC3HAV1LQ96H79 300 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 NEK6Q9HC98 313 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 RBFOX1Q9NWB1 397 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 B3GNT2Q9NY97 397 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 LOC100509620A0A075B734 347 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 CENPXA8MT69 81 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 IL2RAP01589 272 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 CRHP06850 196 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 FAHP16930 419 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 TIMP3P35625 211 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 EFNB2P52799 333 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 DGCR2P98153 550 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 PLA2G7Q13093 441 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 TBRG1Q3YBR2 411 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 PNLDC1Q8NA58 520 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 PPP1R14BQ96C90 147 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 PLSCR4Q9NRQ2 329 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 FBLN5Q9UBX5 448 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
POLR2J3-204ENST00000486319 IGKV1-9A0A0C4DH69 117 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CIB4A0PJX0 185 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 C5orf49A4QMS7 147 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 METTL21EPA6NDL7 271 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ZNF503-AS2A6NEH8 195 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 LANCL1O43813 399 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 SSX4O60224 188 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 TOXO94900 526 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 SERPINA5P05154 406 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CD3GP09693 182 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 UBBP0CG47 229 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 TMIGD3P0DMS9 266 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 APLNRP35414 380 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 HIKESHIQ53FT3 197 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 AWAT2Q6E213 333 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ANGPTL5Q86XS5 388 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ITPKCQ96DU7 683 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CPNE2Q96FN4 548 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 POM121L2Q96KW2 1035 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 GPER1Q99527 375 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 NKX3-1Q99801 234 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 NOX3Q9HBY0 568 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 GHRLQ9UBU3 117 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ADGRG4Q8IZF6 3080 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 hCG_38984A0A1B0GV85 526 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 FAM240BA0A1B0GVZ2 78 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 C19orf84I3L1E1 186 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 SCGNO76038 276 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CCNOP22674 350 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 GDNFP39905 211 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 GSK3AP49840 483 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 UBE2NP61088 152 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 FAM3AP98173 230 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ZNF92Q03936 586 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 MALLQ13021 153 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CNN3Q15417 329 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 UBE2V2Q15819 145 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 FAM189A2Q15884 450 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 KRT74Q7RTS7 529 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 C1orf162Q8NEQ5 155 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 OPA3Q9H6K4 179 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 MRPS28Q9Y2Q9 187 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 CACNG2Q9Y698 323 aa12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 INTS1Q8N201 2190 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-204ENST00000486319 GSTT2BP0CG30 244 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 COX6B1P14854 86 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 COX5AP20674 150 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 PRKACBP22694 351 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 ACKR3P25106 362 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 KIR2DL3P43628 341 aa12.61□□□□□ -0.39
POLR2J3-204ENST00000486319 AP3S2P59780 193 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms