RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OSMP13725 252 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 ANOS1P23352 680 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 EEF1B2P24534 225 aaKnown RBP10.68□□□□□ -0.7
HDAC6-227ENST00000485102 GLYATL3Q5SZD4 288 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 C1QL4Q86Z23 238 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 Q8N7P7 452 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 OR2T33Q8NG76 320 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 OR56B2PQ8NGI1 322 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-227ENST00000485102 ST8SIA4Q92187 359 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 TNFRSF14Q92956 283 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 EME1Q96AY2 570 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 KCNJ15Q99712 375 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 IFT27Q9BW83 186 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 PAPOLBQ9NRJ5 636 aaKnown RBP10.68□□□□□ -0.7
HDAC6-227ENST00000485102 KRT84Q9NSB2 600 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 hCG_1807616A0A1W2PRN6 198 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 H3BN98 237 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 NPFFO15130 113 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 GASTP01350 101 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 NAA10P41227 235 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-227ENST00000485102 ELF3P78545 371 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-227ENST00000485102 ACSM1Q08AH1 577 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 DBPQ10586 325 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-227ENST00000485102 RIPK1Q13546 671 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 WDR38Q5JTN6 314 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 TEX30Q5JUR7 227 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 FAHD1Q6P587 224 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 WDR82Q6UXN9 313 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 REC114Q7Z4M0 266 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 WDR86Q86TI4 376 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 CYB561A3Q8NBI2 242 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 SDR9C7Q8NEX9 313 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 OR2T4Q8NH00 348 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 CCL13Q99616 98 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 DCTN5Q9BTE1 182 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 TLNRD1Q9H1K6 362 aa10.67□□□□□ -0.7
HDAC6-227ENST00000485102 ANKRD30BLA7E2S9 258 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 H3BNX3 289 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 NDUFB3O43676 98 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 AMY2BP19961 511 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 PAICSP22234 425 aaKnown RBP10.66□□□□□ -0.7
HDAC6-227ENST00000485102 KIR2DS4P43632 304 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 ALDH3A2P51648 485 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 UBE2E1P51965 193 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 BLVRAP53004 296 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 FAM3AP98173 230 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 EGR3Q06889 387 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.66□□□□□ -0.7
HDAC6-227ENST00000485102 POU4F2Q12837 409 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 HERPUD1Q15011 391 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 RCN1Q15293 331 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 DPY19L4Q7Z388 723 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 DCXRQ7Z4W1 244 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 AMIGO2Q86SJ2 522 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 PDZD9Q8IXQ8 264 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 BEND2Q8NDZ0 799 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 OR1M1Q8NGA1 313 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 OR9Q2Q8NGE9 314 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 LRRC29Q8WV35 223 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 CFHR4Q92496 578 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 TBC1D23Q9NUY8 699 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 USE1Q9NZ43 259 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 OAZ3Q9UMX2 235 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 COMMD3-BMI1R4GMX3 469 aa10.66□□□□□ -0.7
HDAC6-227ENST00000485102 IGHV3OR15-7A0A075B7D8 119 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 A0A1B0GW55 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 M0R1W7 72 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L2P0CJ85 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L3P0CJ86 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L4P0CJ87 422 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L5P0CJ88 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L6P0CJ89 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L7P0CJ90 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 RPS27P42677 84 aaKnown RBP10.65□□□□□ -0.7
HDAC6-227ENST00000485102 PRKXP51817 358 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 EFNB2P52799 333 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 AANATQ16613 207 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 LRRC10Q5BKY1 277 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 FAM76BQ5HYJ3 339 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SLC35F1Q5T1Q4 408 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 STUMQ69YW2 141 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 KDM4DQ6B0I6 523 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4L9Q6RFH8 374 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-227ENST00000485102 Q6ZTK2 550 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SLC16A9Q7RTY1 509 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 FGFRL1Q8N441 504 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 LNX2Q8N448 690 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DTX3Q8N9I9 347 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 OR10Z1Q8NGY1 313 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 ZNRF4Q8WWF5 429 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 COPS4Q9BT78 406 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SEMA6AQ9H2E6 1030 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 FN3KQ9H479 309 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms