RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SORCS2Q96PQ0 1159 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 UQCC2Q9BRT2 126 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 CRIM1Q9NZV1 1036 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 ABRACLQ9P1F3 81 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 STEAP1Q9UHE8 339 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 PURGQ9UJV8 347 aaKnown RBP17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 FZR1Q9UM11 496 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 MPC1Q9Y5U8 109 aa17.53■□□□□ 0.4
VCPKMT-203ENST00000484763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 LILRA1O75019 489 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 ZNF250P15622 560 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 LSAMPQ13449 338 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 RAB11BQ15907 218 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 OR6M1Q8NGM8 313 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 SYNPRQ8TBG9 265 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 TBC1D15Q8TC07 691 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 SSC4DQ8WTU2 575 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 TMEM171Q8WVE6 324 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 CPNE2Q96FN4 548 aaPredicted RBP17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 MRI1Q9BV20 369 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 PPP1R3EQ9H7J1 279 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 LIN7BQ9HAP6 207 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 RALYQ9UKM9 306 aaKnown RBP17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 SLC7A11Q9UPY5 501 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 PEX16Q9Y5Y5 336 aa17.52■□□□□ 0.4
VCPKMT-203ENST00000484763 CD3EP07766 207 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 HTR2CP28335 458 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 S100A5P33763 92 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 TMEM255AQ5JRV8 349 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 C1orf100Q5SVJ3 147 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 FAM166AQ6J272 317 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 ADAM5Q6NVV9 412 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 VHLLQ6RSH7 139 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 OR6Q1Q8NGQ2 317 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 ZNF671Q8TAW3 534 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 TRMT10AQ8TBZ6 339 aaKnown RBP17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 SPACA5Q96QH8 159 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 CA10Q9NS85 328 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 COMMD3Q9UBI1 195 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 RGS5O15539 181 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 TIMM8AO60220 97 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 KISS1Q15726 138 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 ALKBH6Q3KRA9 238 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 LHFPL2Q6ZUX7 228 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 BORCS8Q96FH0 119 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 NKX3-1Q99801 234 aaPredicted RBP17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 ABCB9Q9NP78 766 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 POU2F3Q9UKI9 436 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 MYO18BQ8IUG5 2567 aa17.51■□□□□ 0.39
VCPKMT-203ENST00000484763 A0A0B4J203 849 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 PYCARD-AS1I3L0S3 204 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CTDSP2O14595 271 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CALCBP10092 127 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 SNRPBP14678 240 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 KIR2DL3P43628 341 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 FUT6P51993 359 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CLDN12P56749 244 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 KLF3P57682 345 aaPredicted RBP17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 MSMPQ1L6U9 139 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CEACAM21Q3KPI0 293 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 PNLDC1Q8NA58 520 aaKnown RBP17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 OR8G5Q8NG78 346 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 GPER1Q99527 375 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 ZNF442Q9H7R0 627 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CNTD2Q9H8S5 307 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 CMAHPQ9Y471 501 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 ATP23Q9Y6H3 246 aa17.5■□□□□ 0.39
VCPKMT-203ENST00000484763 FAM230AA0A1W2PPH8 454 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 PAHP00439 452 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 CA6P23280 308 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 RBP2P50120 134 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 RIN1Q13671 783 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 DMRTC2Q8IXT2 367 aaPredicted RBP17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 OR4D6Q8NGJ1 314 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 LGALS14Q8TCE9 139 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 HPSE2Q8WWQ2 592 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 ITPKCQ96DU7 683 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 HIST1H2AAQ96QV6 131 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 DUSP13Q9UII6 198 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 PLCE1Q9P212 2302 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 IGLV3-9A0A075B6K5 115 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 WIPF3A6NGB9 483 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 IGHV3-13P01766 116 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 MTCP1P56278 107 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 SCAND1P57086 179 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 P2RY14Q15391 338 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 RNF144BQ7Z419 303 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 DVL3Q92997 716 aaPredicted RBP17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 SLC25A28Q96A46 364 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 SPATA2Q9UM82 520 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 RNF115Q9Y4L5 304 aa17.49■□□□□ 0.39
VCPKMT-203ENST00000484763 UBR5O95071 2799 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 FLNCQ14315 2725 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 SHISA9B4DS77 424 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 SIAH2O43255 324 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 RANBP1P43487 201 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 CAPZA1P52907 286 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 ATP1B3P54709 279 aa17.48■□□□□ 0.39
VCPKMT-203ENST00000484763 SELENOVP59797 346 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms