RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 KRT74Q7RTS7 529 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 THAP5Q7Z6K1 395 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 COMMD2Q86X83 199 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 C10orf67Q8IYJ2 551 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 BOLLQ8N9W6 283 aaKnown RBP9.52□□□□□ -0.89
CCM2-213ENST00000480658 CCDC54Q8NEL0 328 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 LRTOMTQ8WZ04 291 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 OR5P3Q8WZ94 311 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 SLC7A6OSQ96CW6 309 aaPredicted RBP9.52□□□□□ -0.89
CCM2-213ENST00000480658 WDFY2Q96P53 400 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 TEAD3Q99594 435 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 PRDM13Q9H4Q3 707 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 MED20Q9H944 212 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 BRD7Q9NPI1 651 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 RASL12Q9NYN1 266 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 TVP23BQ9NYZ1 205 aa9.52□□□□□ -0.89
CCM2-213ENST00000480658 DVL1O14640 695 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 CIB2O75838 187 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 GYPAP02724 150 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 CRYBA1P05813 215 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 GNG3P63215 75 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 RIPPLY1Q0D2K3 151 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 BNIP1Q12981 228 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 TMED1Q13445 227 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 BLMHQ13867 455 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 PTGES3Q15185 160 aaKnown RBP9.51□□□□□ -0.89
CCM2-213ENST00000480658 CEACAM21Q3KPI0 293 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 AWAT1Q58HT5 328 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 FAM201AQ5SY85 155 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 ATPAF1Q5TC12 328 aaPredicted RBP9.51□□□□□ -0.89
CCM2-213ENST00000480658 C1orf146Q5VVC0 180 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 METAP1DQ6UB28 335 aaPredicted RBP9.51□□□□□ -0.89
CCM2-213ENST00000480658 OR5A2Q8NGI9 324 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 ZNF671Q8TAW3 534 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 TBC1D15Q8TC07 691 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 SSMEM1Q8WWF3 244 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 RFKQ969G6 155 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 UTP4Q969X6 686 aaKnown RBP9.51□□□□□ -0.89
CCM2-213ENST00000480658 PKP2Q99959 881 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 PCGF1Q9BSM1 259 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 GABARAPL1Q9H0R8 117 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 FAM53CQ9NYF3 392 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 HAO2Q9NYQ3 351 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 NUFIP1Q9UHK0 495 aaKnown RBP9.51□□□□□ -0.89
CCM2-213ENST00000480658 ENPP5Q9UJA9 477 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 POLDIP2Q9Y2S7 368 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 AP4S1Q9Y587 144 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 ORC6Q9Y5N6 252 aa9.51□□□□□ -0.89
CCM2-213ENST00000480658 BTBD17A6NE02 478 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 C22orf46C9J442 243 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 ZNF670-ZNF695F2Z2N8 137 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 CDIPTO14735 213 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 TNFRSF13BO14836 293 aaPredicted RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 DHRS3O75911 302 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 IGHV4-38-2P0DP08 117 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 EEF1B2P24534 225 aaKnown RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 DBPQ10586 325 aaPredicted RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 SMIM21Q3B7S5 101 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 NCR3LG1Q68D85 454 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 C16orf87Q6PH81 154 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 LYPD2Q6UXB3 125 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 TMEM179BQ7Z7N9 219 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 OR8B12Q8NGG6 310 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 TMEM163Q8TC26 289 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 ST8SIA4Q92187 359 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 DUS3LQ96G46 650 aaKnown RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 RNF170Q96K19 258 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 OR8B4Q96RC9 309 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 ZNF747Q9BV97 191 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 DPAGT1Q9H3H5 408 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 ACOXLQ9NUZ1 547 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 CTSZQ9UBR2 303 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 RPUSD1Q9UJJ7 312 aaKnown RBP9.5□□□□□ -0.89
CCM2-213ENST00000480658 IKZF2Q9UKS7 526 aa9.5□□□□□ -0.89
CCM2-213ENST00000480658 TRBV23-1A0A0A0MS06 115 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 hCG_1809904A0A1W2PP81 198 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 A0A1W2PPE2 198 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 A0A1W2PR64 198 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 A0A1W2PRV1 198 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SNTNA6NMZ2 147 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 ZNF850A8MQ14 1090 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 KRT8P05787 483 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 RPSAP08865 295 aaKnown RBP9.49□□□□□ -0.89
CCM2-213ENST00000480658 PRKACGP22612 351 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 CAV3P56539 151 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SLC9A3R2Q15599 337 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 WDR38Q5JTN6 314 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 ZNF684Q5T5D7 378 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 BCL2L15Q5TBC7 163 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SLX4IPQ5VYV7 408 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 STUMQ69YW2 141 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms