RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ERVK13-1	Q9NX77	482 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	SLCO1C1	Q9NYB5	712 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	PURG	Q9UJV8	347 aa	Known RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	CAB39	Q9Y376	341 aa	Predicted RBP	13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	LRP12	Q9Y561	859 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	SNX5	Q9Y5X3	404 aa		13.08	□□□□□ -0.32
HDLBP-238	ENST00000479894	PTGES3L	E9PB15	166 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	XPNPEP2	O43895	674 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	APOL3	O95236	402 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	NGF	P01138	241 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	EEF1B2	P24534	225 aa	Known RBP	13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	GBX2	P52951	348 aa	Predicted RBP	13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	RAG2	P55895	527 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	PPP1CB	P62140	327 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF154	Q13106	437 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	HFE	Q30201	348 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZMAT1	Q5H9K5	638 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	AHSA2	Q719I0	299 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	CCDC54	Q8NEL0	328 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	SYNPR	Q8TBG9	265 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	PGAM5	Q96HS1	289 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	ALG8	Q9BVK2	526 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	CYSLTR2	Q9NS75	346 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	GNG8	Q9UK08	70 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	FZR1	Q9UM11	496 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	COPS3	Q9UNS2	423 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	LRCH1	Q9Y2L9	728 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	KLHDC2	Q9Y2U9	406 aa		13.07	□□□□□ -0.32
HDLBP-238	ENST00000479894	IGLV3-9	A0A075B6K5	115 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	CLPSL1	A2RUU4	121 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	LOC110117498-PIK3R3	F6TDL0	507 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MYL12B	O14950	172 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	RGS10	O43665	173 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	NDUFA7	O95182	113 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	DBH	P09172	617 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	FAM157B	P0CG42	384 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	RAC2	P15153	192 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	CRHBP	P24387	322 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	KLF3	P57682	345 aa	Predicted RBP	13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	GABARAPL2	P60520	117 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF85	Q03923	595 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	FAM209A	Q5JX71	171 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MBNL2	Q5VZF2	373 aa	Known RBP	13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894		Q6ZPA2	131 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	REC114	Q7Z4M0	266 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	LHFPL3	Q86UP9	236 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	FTMT	Q8N4E7	242 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	OR52N1	Q8NH53	320 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	AMELY	Q99218	206 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MRI1	Q9BV20	369 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MND1	Q9BWT6	205 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	DUSP21	Q9H596	190 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	FKBP14	Q9NWM8	211 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	TAAR3P	Q9P1P4	343 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MRM2	Q9UI43	246 aa	Known RBP	13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	MYRF	Q9Y2G1	1151 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894	NOP16	Q9Y3C1	178 aa	Known RBP	13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894		R4GMQ9	66 aa		13.06	□□□□□ -0.32
HDLBP-238	ENST00000479894		J3QLW9	94 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	CDK1	P06493	297 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	PSKH1	P11801	424 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ATP6V1B1	P15313	513 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF250	P15622	560 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF12	P17014	697 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF19	P17023	458 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	DDOST	P39656	456 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	WNT5A	P41221	380 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF121	P58317	390 aa	Predicted RBP	13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	TAS2R43	P59537	309 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	SLC35A2	P78381	396 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	SLC3A1	Q07837	685 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	HLX	Q14774	488 aa	Predicted RBP	13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	TAF9	Q16594	264 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	TIGD6	Q17RP2	521 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	CCDC58	Q4VC31	144 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ZNF684	Q5T5D7	378 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	BCL2L15	Q5TBC7	163 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	FBXW12	Q6X9E4	464 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	MRPL21	Q7Z2W9	205 aa	Known RBP	13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	SLC7A6	Q92536	515 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	ELMOD3	Q96FG2	381 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	CDCA4	Q9BXL8	241 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	MMP26	Q9NRE1	261 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	DECR2	Q9NUI1	292 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894	INSIG2	Q9Y5U4	225 aa		13.05	□□□□□ -0.32
HDLBP-238	ENST00000479894		A0A0U1RQV5	110 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	PLSCR5	A0PG75	271 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	FAM181B	A6NEQ2	426 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	TBX1	O43435	398 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	MTRF1	O75570	445 aa	Known RBP	13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	CRYBA1	P05813	215 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	HTR1A	P08908	422 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	LIMS3	P0CW19	117 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	LIMS4	P0CW20	117 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	PPIAL4G	P0DN37	164 aa		13.04	□□□□□ -0.32
HDLBP-238	ENST00000479894	CCR9	P51686	369 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms