RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	DVL1	O14640	695 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	IL5RA	Q01344	420 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	MFGE8	Q08431	387 aa	Predicted RBP	12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	BAMBI	Q13145	260 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	SLC9A3R2	Q15599	337 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	SNCB	Q16143	134 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	FAM76B	Q5HYJ3	339 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	WDR38	Q5JTN6	314 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	LCN1P1	Q5VSP4	162 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	C1orf146	Q5VVC0	180 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	CD276	Q5ZPR3	534 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	BRD3OS	Q6XYD6	125 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	MEPCE	Q7L2J0	689 aa	Known RBP	12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	AMIGO2	Q86SJ2	522 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	FTMT	Q8N4E7	242 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	LRTOMT	Q8WZ04	291 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	RPL3L	Q92901	407 aa	Known RBP	12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	OR8B4	Q96RC9	309 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	CNN2	Q99439	309 aa	Known RBP	12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	MICU1	Q9BPX6	476 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	RTL8A	Q9BWD3	113 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	ADGRL4	Q9HBW9	690 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	AP4S1	Q9Y587	144 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596		A0A0U1RQV5	110 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	TMEM269	A0A1B0GVZ9	245 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ACOD1	A6NK06	481 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ANXA2P2	A6NMY6	339 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF879	B4DU55	563 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	CLDN34	H7C241	214 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	TMPRSS2	O15393	492 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	SRSF10	O75494	262 aa	Known RBP	12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ATP5H	O75947	161 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	RNASE1	P07998	156 aa	Known RBP	12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	MUC1	P15941	1255 aa	Predicted RBP	12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	FAS	P25445	335 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	DCTD	P32321	178 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	RASSF2	P50749	326 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	MICB	Q29980	383 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	AWAT1	Q58HT5	328 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	RUSC1-AS1	Q66K80	236 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	STUM	Q69YW2	141 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	KCTD18	Q6PI47	426 aa	Predicted RBP	12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	BTN2A1	Q7KYR7	527 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF679	Q8IYX0	411 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	FAM216B	Q8N7L0	139 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	TCEANC	Q8N8B7	351 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	SCCPDH	Q8NBX0	429 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	TMEM163	Q8TC26	289 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	PIGC	Q92535	297 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	PPP1R14A	Q96A00	147 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	CCL13	Q99616	98 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	PCGF1	Q9BSM1	259 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	MRO	Q9BYG7	248 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	PBOV1	Q9GZY1	135 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	SIRPD	Q9H106	197 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	WDR13	Q9H1Z4	485 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	PRDM13	Q9H4Q3	707 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZMAT3	Q9HA38	289 aa	Known RBP	12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	ABCB9	Q9NP78	766 aa		12.43	□□□□□ -0.42
CCNL1-222	ENST00000479596	TMEM210	A6NLX4	147 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	MAGEB4	O15481	346 aa	Predicted RBP	12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF254	O75437	659 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	LIPF	P07098	398 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	HKR1	P10072	659 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	MTNR1A	P48039	350 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	DEFB112	Q30KQ8	113 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	NXNL2	Q5VZ03	156 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZDHHC13	Q8IUH4	622 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZDHHC23	Q8IYP9	409 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	OR10Z1	Q8NGY1	313 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	OR51E1	Q8TCB6	317 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	ASB17	Q8WXJ9	295 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	ST8SIA4	Q92187	359 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	TAF15	Q92804	592 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	C12orf43	Q96C57	262 aa	Known RBP	12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	RNF170	Q96K19	258 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	WDFY2	Q96P53	400 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	CIB1	Q99828	191 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	PRRG3	Q9BZD7	231 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	GPR84	Q9NQS5	396 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	NUFIP1	Q9UHK0	495 aa	Known RBP	12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	TMEM14A	Q9Y6G1	99 aa		12.42	□□□□□ -0.42
CCNL1-222	ENST00000479596	CENPVL3	A0A0U1RRI6	287 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	SLC22A31	A6NKX4	558 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	P2RY10	O00398	339 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	TOX4	O94842	621 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	TFF1	P04155	84 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	SELL	P14151	372 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	POLR2I	P36954	125 aa	Known RBP	12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	TGM4	P49221	684 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	GPM6A	P51674	278 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	CXCR4	P61073	352 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	C11orf91	Q3C1V1	193 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	DMRTC1	Q5HYR2	192 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	SLC35F2	Q8IXU6	374 aa		12.41	□□□□□ -0.42
CCNL1-222	ENST00000479596	C3orf56	Q8N813	242 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms