RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 APOBEC3DQ96AK3 386 aaPredicted RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 KCNS1Q96KK3 526 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 PPP1R36Q96LQ0 422 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 ZNF75AQ96N20 296 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 OR4K3Q96R72 315 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 NAA38Q9BRA0 125 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 SAMD10Q9BYL1 202 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 RAB33BQ9H082 229 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 CYSTM1Q9H1C7 97 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 DSN1Q9H410 356 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 CWH43Q9H720 699 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 TDRD3Q9H7E2 651 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 ZNF286AQ9HBT8 521 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 FAM60AQ9NP50 221 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 ABCB9Q9NP78 766 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 RRAGDQ9NQL2 400 aaPredicted RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 TREX1Q9NSU2 369 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 MRPL16Q9NX20 251 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 BABAM2Q9NXR7 383 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 MTFP1Q9UDX5 166 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 PSORS1C2Q9UIG4 136 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 LSM7Q9UK45 103 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 STARD10Q9Y365 291 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 FADS3Q9Y5Q0 445 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 AP1M2Q9Y6Q5 423 aa0.22□□□□□ -2.37
HPS3-205ENST00000478525 ZFC3H1O60293 1989 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 YLPM1P49750 1951 aaKnown RBP0.22□□□□□ -2.37
HPS3-205ENST00000478525 CNTNAP1P78357 1384 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 NCKAP5O14513 1909 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 LCTP09848 1927 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 KMT2EQ8IZD2 1858 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 IGKV2-40A0A087WW87 121 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 SMIM26A0A096LP01 95 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 A0A1W2PPE3 182 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 A0A1W2PRG6 482 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ZNF860A6NHJ4 632 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 KNCNA6PVL3 124 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 M0R3G1 203 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RAB29O14966 203 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SCAMP2O15127 329 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC37A4O43826 429 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ENTPD6O75354 484 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SERPINB7O75635 380 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 B3GALNT1O75752 331 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 FARS2O95363 451 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 CXorf1O96002 111 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 NAPSAO96009 420 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 IGKV2D-40P01614 121 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 IGHMP01871 453 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 HLA-AP01891 365 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 SERPINE2P07093 398 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 CRYGBP07316 175 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 OR4Q2P0C623 313 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 IQCF3P0C7M6 154 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 CGB7P0DN87 165 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 CD28P10747 220 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC2A3P11169 496 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 HLA-GP17693 338 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 NCF2P19878 526 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 HTR2CP28335 458 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC6A1P30531 599 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 MAGEA3P43357 314 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 MRPL19P49406 292 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 RND2P52198 227 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 AP1S2P56377 157 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SEC61GP60059 68 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SEMG2Q02383 582 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ELP6Q0PNE2 266 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 TFDP2Q14188 446 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ZNF726P1Q15940 193 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 CDC37Q16543 378 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 CCDC152Q4G0S7 254 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ATP6AP1LQ52LC2 224 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 CCDC183Q5T5S1 534 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 MLIPQ5VWP3 458 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC25A25Q6KCM7 469 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 TMED8Q6PL24 325 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 METAP1DQ6UB28 335 aaPredicted RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 NANOGNBQ7Z5D8 188 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 HORMAD1Q86X24 394 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 PDPNQ86YL7 162 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 SLC22A9Q8IVM8 553 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 UBE2J2Q8N2K1 259 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 MUC15Q8N387 334 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 DRAM1Q8N682 238 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 C11orf72Q8NBR9 251 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 BBOF1Q8ND07 529 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 OR10AD1Q8NGE0 317 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 OR4D6Q8NGJ1 314 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 OR5H2Q8NGV7 314 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ZNF563Q8TA94 476 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RNASE11Q8TAA1 199 aaKnown RBP0.21□□□□□ -2.38
HPS3-205ENST00000478525 KCNG3Q8TAE7 436 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RAD51AP1Q96B01 352 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RCN3Q96D15 328 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 NRBF2Q96F24 287 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 RNF170Q96K19 258 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ALS2CR12Q96Q35 445 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 TRIB3Q96RU7 358 aa0.21□□□□□ -2.38
HPS3-205ENST00000478525 ATP5SQ99766 215 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms