RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 WIF1Q9Y5W5 379 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 MRPS18BQ9Y676 258 aaKnown RBP4.36□□□□□ -1.71
SF3B6-202ENST00000478050 ABCA2Q9BZC7 2435 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 KALRNO60229 2985 aa4.36□□□□□ -1.71
SF3B6-202ENST00000478050 FXYD6-FXYD2A0A087WZ82 144 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 A0A087WZY1 265 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 IGKV1D-43A0A0B4J1Z2 117 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 IGHV5-10-1A0A0J9YXX1 117 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 LOC102725191A0A1B0GVB3 256 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1B0GW55 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 A0A1W2PPL8 197 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 hCG_1807616A0A1W2PRN6 198 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CPED1A4D0V7 1026 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 MEIS3P1A6NDR6 274 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RFPL4AA6NLU0 287 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RFPL4AL1F8VTS6 287 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 H3BML4 177 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 I3L521 148 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TP53I11O14683 189 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 YKT6O15498 198 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ARPC5O15511 151 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TLX3O43711 291 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TRAF3IP2O43734 574 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CFDP00746 253 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CD8AP01732 235 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CHRM2P08172 466 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR4E1P0C645 316 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF735P0CB33 412 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 UBBP0CG47 229 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L2P0CJ85 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L3P0CJ86 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L4P0CJ87 422 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L5P0CJ88 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L6P0CJ89 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4L7P0CJ90 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PGA4P0DJD7 388 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PGA3P0DJD8 388 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 MYF5P13349 255 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RAB3AP20336 220 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 AGTR1P30556 359 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PTGDSP41222 190 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 LGALS4P56470 323 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RPS27AP62979 156 aaKnown RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 UBA52P62987 128 aaKnown RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SLC35A1P78382 337 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CCL7P80098 99 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SRSF4Q08170 494 aaKnown RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 BAMBIQ13145 260 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 MYBPHQ13203 477 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 GK2Q14410 553 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 HLXQ14774 488 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TAF13Q15543 124 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF260Q3ZCT1 412 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RNASE10Q5GAN6 216 aaKnown RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ATPAF1Q5TC12 328 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 FAM69BQ5VUD6 431 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 MBNL2Q5VZF2 373 aaKnown RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF529Q6P280 563 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 GUSBP11Q6P575 273 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM81Q6P7N7 255 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A47Q6Q0C1 308 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ARSKQ6UWY0 536 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF813Q6ZN06 617 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 IDO2Q6ZQW0 420 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PGAP1Q75T13 922 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 CHMP1BQ7LBR1 199 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OVCH2Q7RTZ1 564 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TMPRSS9Q7Z410 1059 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 FJX1Q86VR8 437 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PPP1R3BQ86XI6 285 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 GALNT16Q8N428 558 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 FADS6Q8N9I5 356 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DEFB124Q8NES8 71 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 STEAP2Q8NFT2 490 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR4K17Q8NGC6 315 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR4D6Q8NGJ1 314 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR5D14Q8NGL3 314 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR5M8Q8NGP6 311 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR5M1Q8NGP8 315 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR1J2Q8NGS2 313 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR8S1Q8NH09 359 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 OR6X1Q8NH79 312 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 FGGYQ96C11 551 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SPACA9Q96E40 222 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 RAX2Q96IS3 184 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 NPAS1Q99742 590 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DHRS9Q9BPW9 319 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DEFB126Q9BYW3 111 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 B3GNT4Q9C0J1 378 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 TINAGL1Q9GZM7 467 aaPredicted RBP4.35□□□□□ -1.71
SF3B6-202ENST00000478050 FXYD6Q9H0Q3 95 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PTGES2Q9H7Z7 377 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 WDR54Q9H977 334 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 B3GAT1Q9P2W7 334 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 DUX4Q9UBX2 424 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 PLEKHA6Q9Y2H5 1048 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SESN1Q9Y6P5 492 aa4.35□□□□□ -1.71
SF3B6-202ENST00000478050 SPTBN1Q01082 2364 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms