RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNF626Q68DY1 528 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 LYG2Q86SG7 212 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 SCGB1C1Q8TD33 95 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 SLC39A7Q92504 469 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 APH1AQ96BI3 265 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 ADAM10O14672 748 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 HLA-HP01893 362 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 GRPP07492 148 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 CD46P15529 392 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 IDH3GP51553 393 aaPredicted RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 SNTB1Q13884 538 aaKnown RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 ACTBL2Q562R1 376 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 FIP1L1Q6UN15 594 aaKnown RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 CATSPERDQ86XM0 798 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM229BQ8NBD8 167 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 OR5T1Q8NG75 326 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 FOXB1Q99853 325 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 FAAP24Q9BTP7 215 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TWSG1Q9GZX9 223 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 C1orf123Q9NWV4 160 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 A0A1B0GTQ1 180 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM200CA6NKL6 621 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 RGS13O14921 159 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 B3GALNT1O75752 331 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 IL5P05113 134 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 FAM157BP0CG42 384 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 FCGR2CP31995 323 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 PTGFRP43088 359 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 DSCR4P56555 118 aaPredicted RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 RPS4XP62701 263 aaKnown RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 EFNB1P98172 346 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TGFBR3Q03167 851 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 HLXQ14774 488 aaPredicted RBP9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM255AQ5JRV8 349 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 SEZ6L2Q6UXD5 910 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 NAA40Q86UY6 237 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 CDH26Q8IXH8 852 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 MOB1AQ9H8S9 216 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 C12orf10Q9HB07 376 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 TIMM10BQ9Y5J6 103 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF407Q9C0G0 2248 aa9.78□□□□□ -0.84
COL27A1-204ENST00000477421 MED13LQ71F56 2210 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 COL6A6A6NMZ7 2263 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 A0A0G2JK05 382 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 C7orf66A4D0T2 115 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 HAAOP46952 286 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 RRADP55042 308 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 RAG2P55895 527 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 DCAF12L2Q5VW00 463 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 FAM122BQ7Z309 247 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 ST8SIA2Q92186 375 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 NPAS1Q99742 590 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 NELFAQ9H3P2 528 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 DUSP13Q9UII6 198 aa9.77□□□□□ -0.84
COL27A1-204ENST00000477421 D6RAR5 112 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ERVH48-1M5A8F1 160 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 CFDP00746 253 aaPredicted RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 TTRP02766 147 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 VSIG8P0DPA2 414 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ATPAF1Q5TC12 328 aaPredicted RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 DEGS2Q6QHC5 323 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ACOT7LQ6ZUV0 252 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ZSCAN4Q8NAM6 433 aaPredicted RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 TMEM104Q8NE00 496 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 OR52H1Q8NGJ2 320 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF75AQ96N20 296 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 UFSP2Q9NUQ7 469 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 TRAPPC2LQ9UL33 140 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 KRBOX1C9JBD0 128 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 GSTZ1O43708 216 aaPredicted RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 TNFSF15O95150 251 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 IFNA5P01569 189 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 HIST1H1DP16402 221 aaKnown RBP9.77□□□□□ -0.85
COL27A1-204ENST00000477421 IL11RAQ14626 422 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 C3AR1Q16581 482 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 AANATQ16613 207 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 UBALD2Q8IYN6 164 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 CMTM3Q96MX0 182 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 ZNF426Q9BUY5 554 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 BCO1Q9HAY6 547 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 OPN4Q9UHM6 478 aa9.77□□□□□ -0.85
COL27A1-204ENST00000477421 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 SULT1C2O00338 296 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 RAMP1O60894 148 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 IFNA2P01563 188 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ITGB2P05107 769 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 VSIG10L2P0DP72 767 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ASCL1P50553 236 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 RPS11P62280 158 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL27A1-204ENST00000477421 C19orf57Q0VDD7 668 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 ECH1Q13011 328 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 KCNRGQ8N5I3 272 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 OR10D3Q8NH80 312 aa9.76□□□□□ -0.85
COL27A1-204ENST00000477421 MAGT1Q9H0U3 335 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms