RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	P2RX1	P51575	399 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	KRTAP10-10	P60014	251 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	TSPAN5	P62079	268 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	RPL31	P62899	125 aa	Known RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	RPL18A	Q02543	176 aa	Known RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	C2orf54	Q08AI8	447 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	TNXA	Q16473	311 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	CHRFAM7A	Q494W8	412 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	COX19	Q49B96	90 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ORMDL2	Q53FV1	153 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	CPTP	Q5TA50	214 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	HMGN2P46	Q86SG4	172 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	SETD3	Q86TU7	594 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	CYP4Z1	Q86W10	505 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	LRRC6	Q86X45	466 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	METTL13	Q8N6R0	699 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	UBAC2	Q8NBM4	344 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	OR10Z1	Q8NGY1	313 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	C15orf40	Q8WUR7	153 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ING5	Q8WYH8	240 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	RGP1	Q92546	391 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ESR2	Q92731	530 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	NTAN1	Q96AB6	310 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ARL5B	Q96KC2	179 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	BTN2A3P	Q96KV6	586 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ZNF396	Q96N95	335 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	TIMM17A	Q99595	171 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	UQCC2	Q9BRT2	126 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	LLPH	Q9BRT6	129 aa	Known RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ZNF2	Q9BSG1	426 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	RTBDN	Q9BSG5	229 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	EDA2R	Q9HAV5	297 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	TMBIM4	Q9HC24	238 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	MYOZ1	Q9NP98	299 aa	Predicted RBP	2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	UBAP1	Q9NZ09	502 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	CES1P1	Q9UKY3	287 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	POFUT2	Q9Y2G5	429 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	ATP6V1D	Q9Y5K8	247 aa		2.34	□□□□□ -2.03
RBM39-231	ENST00000477334	FHOD3	Q2V2M9	1422 aa		2.34	□□□□□ -2.04
RBM39-231	ENST00000477334	TNS2	Q63HR2	1409 aa		2.34	□□□□□ -2.04
RBM39-231	ENST00000477334	ADAMTS13	Q76LX8	1427 aa		2.34	□□□□□ -2.04
RBM39-231	ENST00000477334	DENND4A	Q7Z401	1863 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	TRAV8-7	A0A075B6U6	113 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	IGLV1-36	A0A0B4J1U3	117 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	NCBP2L	A6PVI3	153 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	ZNF207	O43670	478 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CALU	O43852	315 aa	Predicted RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	ALOX12B	O75342	701 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CDK14	O94921	469 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	MPZL1	O95297	269 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	GCG	P01275	180 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	APCS	P02743	223 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	PGA5	P0DJD9	388 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CD37	P11049	281 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	DTYMK	P23919	212 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CD40LG	P29965	261 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	PFN2	P35080	140 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	HCAR3	P49019	387 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	UBE2N	P61088	152 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	PPP1CB	P62140	327 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	RPS23	P62266	143 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	SKP1	P63208	163 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	STX4	Q12846	297 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	MAD2L1BP	Q15013	274 aa	Predicted RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	IRF4	Q15306	451 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	MAPRE2	Q15555	327 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	TAL2	Q16559	108 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	GCSAML	Q5JQS6	135 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	SAXO2	Q658L1	398 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CLEC6A	Q6EIG7	209 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	OR2T5	Q6IEZ7	315 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	FAHD1	Q6P587	224 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CD300LG	Q6UXG3	332 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	RAB43	Q86YS6	212 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CALHM1	Q8IU99	346 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CRLF3	Q8IUI8	442 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CBLN2	Q8IUK8	224 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	CD302	Q8IX05	232 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	SELENOH	Q8IZQ5	122 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	OR11H7	Q8NGC8	314 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	OR2T29	Q8NH02	315 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	PIFO	Q8TCI5	191 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	HAUS1	Q96CS2	278 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	L3HYPDH	Q96EM0	354 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	SGTB	Q96EQ0	304 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	SERPINB11	Q96P15	392 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	COL21A1	Q96P44	957 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	OSBPL11	Q9BXB4	747 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	PARVG	Q9HBI0	331 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	MED4	Q9NPJ6	270 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	OR2S2	Q9NQN1	319 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	NKIRAS1	Q9NYS0	192 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	MRM2	Q9UI43	246 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	ENPP5	Q9UJA9	477 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	NXT1	Q9UKK6	140 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	LRPPRC	P42704	1394 aa	Known RBP	2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	BRWD3	Q6RI45	1802 aa		2.33	□□□□□ -2.04
RBM39-231	ENST00000477334	TRAV40	A0A0B4J280	105 aa		2.32	□□□□□ -2.04
RBM39-231	ENST00000477334	GOLGA8IP	A6NC78	632 aa		2.32	□□□□□ -2.04
RBM39-231	ENST00000477334		H7C1H1	209 aa		2.32	□□□□□ -2.04

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