RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 NDUFAF4Q9P032 175 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 KAAG1Q9UBP8 84 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 CD300AQ9UGN4 299 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 CYB5R1Q9UHQ9 305 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 BAIAP2Q9UQB8 552 aa6.01□□□□□ -1.45
BRCA1-214ENST00000477152 IGLV1-36A0A0B4J1U3 117 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 NKX6-3A6NJ46 265 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ANXA2P2A6NMY6 339 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 NDUFB3O43676 98 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PAHP00439 452 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 IFNGP01579 166 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 GRPP07492 148 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 FMO3P31513 532 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 MSX2P35548 267 aaPredicted RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 TGFBR2P37173 567 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ERFP50548 548 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 KHDRBS1Q07666 443 aaKnown RBP eCLIP6□□□□□ -1.45
BRCA1-214ENST00000477152 MEP1BQ16820 701 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 KRTAP27-1Q3LI81 207 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 LRRC10Q5BKY1 277 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PRAMEF6Q5VXH4 476 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 LDLRAD3Q86YD5 345 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 LINC00346Q8IVM7 164 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 OR6V1Q8N148 313 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CSNK2A3Q8NEV1 391 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 OR4K13Q8NH42 304 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 OR52J3Q8NH60 311 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 OR5R1Q8NH85 324 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 LHX4Q969G2 390 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ITFG2Q969R8 447 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 C12orf43Q96C57 262 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 PYURFQ96I23 114 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CITED1Q99966 193 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 FAM234AQ9H0X4 552 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 GORASP2Q9H8Y8 452 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 WDR76Q9H967 626 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 C1orf123Q9NWV4 160 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CENPVL3A0A0U1RRI6 287 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1W2PPH5 198 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ANKRD61A6NGH8 418 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 B5MCH6 92 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF878C9JN71 531 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 NME4O00746 187 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CLPXO76031 633 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PTBP3O95758 552 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 FABP3P05413 133 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 HIST1H1CP16403 213 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 PAICSP22234 425 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 HSD11B1P28845 292 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PRDX6P30041 224 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PSME3P61289 254 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 IL5RAQ01344 420 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 TSPAN31Q12999 210 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PMS2P11Q13670 270 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 TIGD6Q17RP2 521 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 SPATS1Q496A3 300 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CDONQ4KMG0 1287 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 SAMD4BQ5PRF9 694 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 CLEC12AQ5QGZ9 265 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 NCR3LG1Q68D85 454 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 SFRP4Q6FHJ7 346 aaPredicted RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 PGBD2Q6P3X8 592 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 LYPD2Q6UXB3 125 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF841Q6ZN19 808 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CFAP77Q6ZQR2 320 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 BTN2A1Q7KYR7 527 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 DPY19L4Q7Z388 723 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 RNF152Q8N8N0 203 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CYB561A3Q8NBI2 242 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ST8SIA4Q92187 359 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 MED30Q96HR3 178 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 NSMCE2Q96MF7 247 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 MICU1Q9BPX6 476 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 CHIAQ9BZP6 476 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 DNTTIP1Q9H147 329 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 RAB18Q9NP72 206 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 IL1RAPQ9NPH3 570 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ARMCX1Q9P291 453 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 ABCD2Q9UBJ2 740 aa6□□□□□ -1.45
BRCA1-214ENST00000477152 PRPF19Q9UMS4 504 aaKnown RBP6□□□□□ -1.45
BRCA1-214ENST00000477152 TENM1Q9UKZ4 2725 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 TRBV4-1A0A0J9YWV2 114 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 IGHV3-64DA0A0J9YX35 117 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 MDFIC2A0A1B0GVS7 189 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 DVL1O14640 695 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 GPR137BO60478 399 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 GYPAP02724 150 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 NCK1P16333 377 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF26P17031 533 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-214ENST00000477152 PMELP40967 661 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 ENTPD1P49961 510 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 ARF6P62330 175 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 FAM201AQ5SY85 155 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 TEX36Q5VZQ5 186 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 METAP1DQ6UB28 335 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-214ENST00000477152 ZDHHC21Q8IVQ6 265 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 SDR9C7Q8NEX9 313 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 OR52H1Q8NGJ2 320 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 TSSK2Q96PF2 358 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 HIST1H2AAQ96QV6 131 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms