RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 GADD45GO95257 159 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 SEMG1P04279 462 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 COX4I1P13073 169 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 COX7A1P24310 79 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 ACKR3P25106 362 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 POU1F1P28069 291 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 GABRA2P47869 451 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 CEBPDP49716 269 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-219ENST00000476625 GSK3AP49840 483 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 TAF13Q15543 124 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 TIGD6Q17RP2 521 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 VAX1Q5SQQ9 334 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 PRSS45Q7RTY3 260 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 REC114Q7Z4M0 266 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 OR9Q2Q8NGE9 314 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 ANGPTL6Q8NI99 470 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 HPSE2Q8WWQ2 592 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 KCTD14Q9BQ13 255 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-219ENST00000476625 SIKE1Q9BRV8 207 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 TLNRD1Q9H1K6 362 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 SP140LQ9H930 580 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 MED20Q9H944 212 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 KCNG2Q9UJ96 466 aa9.7□□□□□ -0.86
HDAC6-219ENST00000476625 FAM32AQ9Y421 112 aaKnown RBP9.7□□□□□ -0.86
HDAC6-219ENST00000476625 IGKV1D-17A0A075B6S4 117 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 WI2-2373I1.2A0A1W2PRP0 233 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 DHRS12A0PJE2 317 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 NKX6-3A6NJ46 265 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF850A8MQ14 1090 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 H0YAE9 185 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF593O00488 134 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-219ENST00000476625 CCL3L1P16619 93 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 GRK5P34947 590 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 MSX2P35548 267 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-219ENST00000476625 GSSP48637 474 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 ENTPD1P49961 510 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 NUDT2P50583 147 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF121P58317 390 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-219ENST00000476625 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 PPP1R8Q12972 351 aaKnown RBP9.69□□□□□ -0.86
HDAC6-219ENST00000476625 PRDX4Q13162 271 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 CRMP1Q14194 572 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 EIF2B1Q14232 305 aaKnown RBP9.69□□□□□ -0.86
HDAC6-219ENST00000476625 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 GLYATQ6IB77 296 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 PGBD2Q6P3X8 592 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 KCTD8Q6ZWB6 473 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 SPERTQ8NA61 448 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 TMEM185AQ8NFB2 350 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 OR4Q3Q8NH05 313 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 PPP1R14AQ96A00 147 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 LYZL4Q96KX0 146 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF488Q96MN9 340 aa9.69□□□□□ -0.86
HDAC6-219ENST00000476625 HMGB1P1B2RPK0 211 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF878C9JN71 531 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 M0R1W7 72 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 XRCC2O43543 280 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 RRM2P31350 389 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 ACSM1Q08AH1 577 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 ATPAF1Q5TC12 328 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF782Q6ZMW2 699 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 C11orf42Q8N5U0 333 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 OR4M1Q8NGD0 313 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 OR6K6Q8NGW6 343 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 WIPF2Q8TF74 440 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 BTBD10Q9BSF8 475 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 CDCA4Q9BXL8 241 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 METTL8Q9H825 291 aaKnown RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 YY1AP1Q9H869 796 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 DCAF13Q9NV06 445 aaKnown RBP9.68□□□□□ -0.86
HDAC6-219ENST00000476625 NLKQ9UBE8 527 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF222Q9UK12 451 aa9.68□□□□□ -0.86
HDAC6-219ENST00000476625 OR2AT4A6NND4 320 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 SIGLEC5O15389 551 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 SOX14O95416 240 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 ACAA1P09110 424 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-219ENST00000476625 PSG2P11465 335 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 SPI1P17947 270 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 HSD11B1P28845 292 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 NAA10P41227 235 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-219ENST00000476625 PSME3P61289 254 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 KRT72Q14CN4 511 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 C11orf91Q3C1V1 193 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 NCR3LG1Q68D85 454 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 ARPINQ7Z6K5 226 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 RP9Q8TA86 221 aaKnown RBP9.67□□□□□ -0.86
HDAC6-219ENST00000476625 OR5P3Q8WZ94 311 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 PIGCQ92535 297 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 C12orf43Q96C57 262 aaKnown RBP9.67□□□□□ -0.86
HDAC6-219ENST00000476625 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 KRCC1Q9NPI7 259 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-219ENST00000476625 ARMC1Q9NVT9 282 aa9.67□□□□□ -0.86
HDAC6-219ENST00000476625 FAM183AA6NL82 134 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 SASH3O75995 380 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 GLRA1P23415 457 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-219ENST00000476625 DCTDP32321 178 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 GNALP38405 381 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 GPM6AP51674 278 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 BLCAPP62952 87 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms