RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MENTQ9BUN1 341 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PISDQ9UG56 409 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RARRES3Q9UL19 164 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 DENND4CQ5VZ89 1909 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 KIR2DS5A0A0G2JLQ3 304 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 A0A0G2JNG1 304 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR6C65A6NJZ3 312 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR4C45A6NMZ5 311 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF705GA8MUZ8 300 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 KIR2DS3K7RE56 304 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 TNFSF11O14788 317 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR2T1O43869 369 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 NKX2-2O95096 273 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SCAF4O95104 1147 aaKnown RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 KLK3P07288 261 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SP9P0CG40 484 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SULT1A3P0DMM9 295 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SULT1A4P0DMN0 295 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 AFF3P51826 1226 aaKnown RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GAS1P54826 345 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 NDUFA6P56556 154 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 INSM1Q01101 510 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 BDH1Q02338 343 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 KIR2DS5Q14953 304 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 PEA15Q15121 130 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SHEQ5VZ18 495 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 LCN15Q6UWW0 184 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ASCL5Q7RTU5 278 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OVCH1Q7RTY7 1134 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 FAM24BQ8N5W8 94 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 HPSE2Q8WWQ2 592 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ANAPC16Q96DE5 110 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF285Q96NJ3 590 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GABRG3Q99928 467 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 PBOV1Q9GZY1 135 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 UFSP2Q9NUQ7 469 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 KLK13Q9UKR3 277 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SPTY2D1-AS1A0A0U1RR47 76 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 PRAF2O60831 178 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 IAPPP10997 89 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 DPP4P27487 766 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 S100A2P29034 98 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 CRABP1P29762 137 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GABREP78334 506 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 FOXC1Q12948 553 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 MYBPHQ13203 477 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 C9orf152Q5JTZ5 239 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR8G2PQ6IF36 304 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 LINC00299Q6ZSB3 139 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SSX9Q7RTT3 188 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SLC51BQ86UW2 128 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF595Q8IYB9 648 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 LSMEM1Q8N8F7 131 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR52N5Q8NH56 324 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 UBL7Q96S82 380 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SLC25A32Q9H2D1 315 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GDF2Q9UK05 429 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 VSIG4Q9Y279 399 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ATG2AQ2TAZ0 1938 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1B0GUH1 482 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 A8MVM7 634 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 C1orf196B1AJZ1 125 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 XRCC3O43542 346 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GIPP09681 153 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ICAM2P13598 275 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 MSR1P21757 451 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 EGR4Q05215 589 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 NKAIN1Q4KMZ8 207 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 CLVS2Q5SYC1 327 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR2A2Q6IF42 318 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 SLC22A25Q6T423 547 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 RAB11FIP2Q7L804 512 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF808Q8N4W9 903 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 UBAC2Q8NBM4 344 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 CLEC1AQ8NC01 280 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR1M1Q8NGA1 313 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR52H1Q8NGJ2 320 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 PTPMT1Q8WUK0 201 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 NR4A3Q92570 626 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 INTS12Q96CB8 462 aaKnown RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 WFIKKN1Q96NZ8 548 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 OR8B4Q96RC9 309 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 STACQ99469 402 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 GFI1Q99684 422 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 WDR13Q9H1Z4 485 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ANKRD19PQ9H560 264 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 LDAHQ9H6V9 325 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 UNKLQ9H9P5 680 aaKnown RBP4.43□□□□□ -1.7
CCDC39-204ENST00000476379 FANCFQ9NPI8 374 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 INPP5EQ9NRR6 644 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 MTFP1Q9UDX5 166 aa4.43□□□□□ -1.7
CCDC39-204ENST00000476379 C5orf63A6NC05 138 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 MSGN1A6NI15 193 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 DPM1O60762 260 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PTP4A3O75365 173 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms