RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GTF2E2P29084 291 aaKnown RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 OTX1P32242 354 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 OPRK1P41145 380 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CRISP1P54107 249 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CDKN2DP55273 166 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 RGS8P57771 180 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 PITPNAQ00169 270 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CT45A1Q5HYN5 189 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 TTC23LQ6PF05 361 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CENPQQ7L2Z9 268 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 NEGR1Q7Z3B1 354 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CTAGE6Q86UF2 777 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 WDFY1Q8IWB7 410 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CHST4Q8NCG5 386 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 OR4C5Q8NGB2 326 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CT45A3Q8NHU0 189 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 LYPD6BQ8NI32 183 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 FAM81AQ8TBF8 368 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 DNAJB3Q8WWF6 145 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 PTX4Q96A99 478 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF488Q96MN9 340 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 NEK6Q9HC98 313 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 TSSC4Q9Y5U2 329 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 MYO7AQ13402 2215 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 WDFY4Q6ZS81 3184 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 ZFHX2Q9C0A1 2572 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 LCTP09848 1927 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 IGHV1OR15-9A0A0B4J2B8 117 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 H7C417 338 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 SCAMP2O15127 329 aaKnown RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 RRP8O43159 456 aaKnown RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 RAD51CO43502 376 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 CCNE2O96020 404 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 AGTP01019 485 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF14P17017 642 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 KIR3DL2P43630 455 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 C21orf59P57076 290 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 LIPEQ05469 1076 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 MGAT3Q09327 533 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 CDC20Q12834 499 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 ITGB3BPQ13352 177 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 TRAM2Q15035 370 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 RCN1Q15293 331 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 PRSS8Q16651 343 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 TCEAL5Q5H9L2 206 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 AVPI1Q5T686 147 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 ZFP1Q6P2D0 407 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 C12orf54Q6X4T0 127 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 CDKL3Q8IVW4 592 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 MYOCDQ8IZQ8 938 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 COX18Q8N8Q8 333 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 NECAP1Q8NC96 275 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 OR52E2Q8NGJ4 325 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 OR52P1PQ8NH57 321 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 APH1BQ8WW43 257 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 TCEAL3Q969E4 200 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 PANX1Q96RD7 426 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 MYCBPQ99417 103 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 DOK1Q99704 481 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 HSD17B10Q99714 261 aaKnown RBP2.72□□□□□ -1.97
PTCD3-211ENST00000476215 RNF5Q99942 180 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 OR52D1Q9H346 318 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 TMEM185BQ9H7F4 350 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 RETNQ9HD89 108 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 MTFP1Q9UDX5 166 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 SLC17A4Q9Y2C5 497 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 MYH7BA7E2Y1 1941 aa2.72□□□□□ -1.97
PTCD3-211ENST00000476215 TRAV19A0A0A6YYK7 116 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 TRIM64CA6NLI5 447 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 C5orf67F2Z3F1 127 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 NVLO15381 856 aaKnown RBP2.71□□□□□ -1.98
PTCD3-211ENST00000476215 HUS1O60921 280 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 CTSLP07711 333 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 OR8U9P0C7N5 309 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 ATF6P18850 670 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 BCKDHBP21953 392 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 CD52P31358 61 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 CXCL12P48061 93 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 IFT88Q13099 833 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 PIGHQ14442 188 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-211ENST00000476215 NPSR1Q6W5P4 371 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 BBS5Q8N3I7 341 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 NPWQ8N729 165 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 LILRB4Q8NHJ6 448 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 LINC01560Q8TB33 94 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 MCUR1Q96AQ8 359 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 RMI2Q96E14 147 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 COL21A1Q96P44 957 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 CHP1Q99653 195 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 FOXC2Q99958 501 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 RTBDNQ9BSG5 229 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-211ENST00000476215 TMEM165Q9HC07 324 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 C6orf50Q9HD87 102 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 NRBP2Q9NSY0 501 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 PTTG3PQ9NZH4 202 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 MTCH1Q9NZJ7 389 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 USP34Q70CQ2 3546 aa2.71□□□□□ -1.98
PTCD3-211ENST00000476215 MYO15AQ9UKN7 3530 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms