RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 NUP54Q7Z3B4 507 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 CACUL1Q86Y37 369 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 FAM160A2Q8N612 972 aaPredicted RBP9.39□□□□□ -0.91
ABCF1-205ENST00000475993 LRRC75AQ8NAA5 344 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 PPP1R14AQ96A00 147 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 SNX22Q96L94 193 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 SMDT1Q9H4I9 107 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 ELOVL3Q9HB03 270 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
ABCF1-205ENST00000475993 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 TRBV11-1A0A0K0K1C0 115 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MEGF11A6BM72 1044 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 GMFGO60234 142 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR2J2O76002 312 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 GABRA3P34903 492 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 TAGLN2P37802 199 aaKnown RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 FHITP49789 147 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 RAB28P51157 221 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 METAP1P53582 386 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ZP2Q05996 745 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SLC17A1Q14916 467 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MLF2Q15773 248 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MEX3BQ6ZN04 569 aaKnown RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ZNF550Q7Z398 422 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CSNK1A1LQ8N752 337 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SUMF2Q8NBJ7 301 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 NKD1Q969G9 470 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR8B4Q96RC9 309 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 INTS14Q96SY0 518 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MEMO1Q9Y316 297 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 V9GYS6 101 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CACNA1CQ13936 2221 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 COL4A6Q14031 1691 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 GEMIN2O14893 280 aaKnown RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 AMBPP02760 352 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CXCR1P25024 350 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CAMLGP49069 296 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 PPM1FP49593 454 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 GPR18Q14330 331 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 RAB35Q15286 201 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ATP6V1FQ16864 119 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 HIKESHIQ53FT3 197 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SLC35E3Q7Z769 313 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ZNF761Q86XN6 746 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MFSD9Q8NBP5 474 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 TMEM104Q8NE00 496 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR5T1Q8NG75 326 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR13C9Q8NGT0 318 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OR4K15Q8NH41 348 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 OTOSQ8NHW6 89 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 WFDC12Q8WWY7 111 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SMARCD2Q92925 531 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SLC25A44Q96H78 314 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 NPY4RP50391 375 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 MEP1BQ16820 701 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 CHST4Q8NCG5 386 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 RNASEH2CQ8TDP1 164 aaKnown RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 RAB39BQ96DA2 213 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
ABCF1-205ENST00000475993 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 DKKL1Q9UK85 242 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 INSL5Q9Y5Q6 135 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 ARID1AO14497 2285 aa9.38□□□□□ -0.91
ABCF1-205ENST00000475993 H3BQ15 152 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 H7C1C5 153 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 DEDDO75618 318 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 CEBPBP17676 345 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 LCN6P62502 163 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 SPOCK1Q08629 439 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 ITPRIPL2Q3MIP1 535 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 VAX1Q5SQQ9 334 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 SLC22A25Q6T423 547 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 KMT5CQ86Y97 462 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 LYG1Q8N1E2 194 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 FAM46BQ96A09 425 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 COX14Q96I36 57 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 SF3B5Q9BWJ5 86 aaKnown RBP9.37□□□□□ -0.91
ABCF1-205ENST00000475993 GPR87Q9BY21 358 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 STRAPQ9Y3F4 350 aaKnown RBP9.37□□□□□ -0.91
ABCF1-205ENST00000475993 TLCD2A6NGC4 264 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 M0QZ24 198 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 NRG2O14511 850 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-205ENST00000475993 TSPAN2O60636 221 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
ABCF1-205ENST00000475993 CYBAP13498 195 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 GNB3P16520 340 aa9.37□□□□□ -0.91
ABCF1-205ENST00000475993 GABRR1P24046 479 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms