RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZNF621Q6ZSS3 439 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SERPINA9Q86WD7 417 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CRIPAKQ8N1N5 446 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 M1APQ8TC57 530 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 UBASH3BQ8TF42 649 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 LHX4Q969G2 390 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MYEOVQ96EZ4 313 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PEBP4Q96S96 227 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 DPH2Q9BQC3 489 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MIEN1Q9BRT3 115 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RERGLQ9H628 205 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM27Q9HBJ8 222 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FARSAQ9Y285 508 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SCN1AP35498 2009 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TGIF2-C20orf24A0A0A6YYL0 155 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NPIPA5A0A0B4J1W7 369 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TSPAN11A1L157 253 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 AQP7P3A6NL99 342 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 GRXCR1A8MXD5 290 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NPIPA5E9PKD4 350 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NPIPA3F8WFD2 350 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 K7EN84 100 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 AGRPO00253 132 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 AQP7O14520 342 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 GOSR2O14653 212 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SSNA1O43805 119 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RDH16O75452 317 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RPL4P36578 427 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SLC6A8P48029 635 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RPS16P62249 146 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 LSM3P62310 102 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 ST3GAL4Q11206 333 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM115Q12893 351 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RAB6CQ53S08 254 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 COA6Q5JTJ3 125 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 C10orf107Q8IVU9 208 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SLC30A8Q8IWU4 369 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PNPLA1Q8N8W4 532 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR5M3Q8NGP4 307 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR2AE1Q8NHA4 323 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 HMGCLL1Q8TB92 370 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 HOXB13Q92826 284 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NRTNQ99748 197 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NRIP2Q9BQI9 281 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SNRNP25Q9BV90 132 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 COL25A1Q9BXS0 654 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RAB6CQ9H0N0 254 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NPIPA1Q9UND3 350 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TMED3Q9Y3Q3 217 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PATJQ8NI35 1801 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 A0A1W2PR80 420 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TCRBV5S2A0A599 114 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 VWC2LB2RUY7 222 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 XKRYO14609 159 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 WDR1O75083 606 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 IGFBP6P24592 240 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SRIP30626 198 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 BDKRB1P46663 353 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RPS9P46781 194 aaKnown RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 GLRBP48167 497 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 BTN3A2P78410 334 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 LCN2P80188 198 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TIMM50Q3ZCQ8 353 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 LCTLQ6UWM7 567 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 ZDHHC23Q8IYP9 409 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 FGFRL1Q8N441 504 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR10G9Q8NGN4 311 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PPCDCQ96CD2 204 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TEX101Q9BY14 249 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 VN1R1Q9GZP7 353 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SEC61A2Q9H9S3 476 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 ACOT13Q9NPJ3 140 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 UBQLN4Q9NRR5 601 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 MARCOQ9UEW3 520 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SLC23A2Q9UGH3 650 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PGA3P0DJD8 388 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PGAM2P15259 253 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NSG1P42857 185 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 NPBWR2P48146 333 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR10A3P58181 314 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 GNG3P63215 75 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 PAFAH1B2P68402 229 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 DLK1P80370 383 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM267Q0VDI3 215 aaPredicted RBP4.28□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF234Q14588 700 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 C8orf31Q8N9H6 132 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR4C5Q8NGB2 326 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 OR1S2Q8NGQ3 325 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 TERB2Q8NHR7 220 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 RPEQ96AT9 228 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 GPR22Q99680 433 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 LINC00470Q9BZP3 86 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 CWH43Q9H720 699 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms