RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CBX5P45973 191 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 PPIAP62937 165 aaKnown RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 RIPPLY1Q0D2K3 151 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ARL6IP1Q15041 203 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 CNN3Q15417 329 aaKnown RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 TGIF1Q15583 401 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ACTBL2Q562R1 376 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 ATP1A1-AS1Q5TC04 95 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ATPAF1Q5TC12 328 aaPredicted RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 IDO2Q6ZQW0 420 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ZNF767PQ75MW2 155 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 C1QL2Q7Z5L3 287 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 RTN4RL2Q86UN3 420 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 TUSC5Q8IXB3 177 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 TMEM178AQ8NBL3 297 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 CHST4Q8NCG5 386 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 OR52B4Q8NGK2 314 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 NUDCD2Q8WVJ2 157 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ST8SIA4Q92187 359 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 SNAPC3Q92966 411 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 RAB3CQ96E17 227 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 GPER1Q99527 375 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 PRRT1Q99946 306 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ZNF69Q9UC07 566 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 HSPB11Q9Y547 144 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 LIPGQ9Y5X9 500 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 SPEGQ15772 3267 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PRR33A8MZF0 331 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 RAD51DO75771 328 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 SNAPC5O75971 98 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 RGS11O94810 467 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 IL2RAP01589 272 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 LCATP04180 440 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 OR4E1P0C645 316 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PATE4P0C8F1 98 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 EDN3P14138 238 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 MGMTP16455 207 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PRKACBP22694 351 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 CPT2P23786 658 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 GNG2P59768 71 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 ARF1P84077 181 aaKnown RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 FAM3AP98173 230 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 SRSF4Q08170 494 aaKnown RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 GK2Q14410 553 aaPredicted RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 SLC10A1Q14973 349 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PPA1Q15181 289 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 ZNF766Q5HY98 468 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PABPC1L2AQ5JQF8 200 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 RTL6Q6ICC9 239 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 FAHD2BQ6P2I3 314 aaPredicted RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 LHFPL2Q6ZUX7 228 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 MUC20Q8N307 709 aaPredicted RBP8.53□□□□□ -1.04
USP39-214ENST00000474572 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 UXS1Q8NBZ7 420 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 OR2AE1Q8NHA4 323 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 LILRB4Q8NHJ6 448 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 FNDC9Q8TBE3 224 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 TNFAIP8L1Q8WVP5 186 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 FAHD2AQ96GK7 314 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 WDYHV1Q96HA8 205 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 Q96M66 194 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 TECTBQ96PL2 329 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 CHST6Q9GZX3 395 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 BANF2Q9H503 90 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 HEXA-AS1Q9H8Q6 139 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 IFT46Q9NQC8 304 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 GPR173Q9NS66 373 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 IL36GQ9NZH8 169 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 VSIG4Q9Y279 399 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 PLEKHA6Q9Y2H5 1048 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 ZNF175Q9Y473 711 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 MED13Q9UHV7 2174 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
USP39-214ENST00000474572 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 TRGV5A0A0B4J1U4 118 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SPAARA0A1B0GVQ0 90 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ZNF587BE7ETH6 402 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 CRTAPO75718 401 aaPredicted RBP8.52□□□□□ -1.05
USP39-214ENST00000474572 IGHG3P01860 377 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 RLN1P04808 185 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 FCGR2AP12318 317 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ZNF24P17028 368 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 HLA-GP17693 338 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 S100A1P23297 94 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 ZBTB25P24278 435 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 TNFSF10P50591 281 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SNRPD2P62316 118 aaKnown RBP8.52□□□□□ -1.05
USP39-214ENST00000474572 ZNF92Q03936 586 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 SRYQ05066 204 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 TCF15Q12870 199 aa8.52□□□□□ -1.05
USP39-214ENST00000474572 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
USP39-214ENST00000474572 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms