RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 FBN3Q75N90 2809 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 TMEM210A6NLX4 147 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 J3QLI3 93 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 PHF1O43189 567 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 DHRS3O75911 302 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 TTRP02766 147 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 SEC61A1P61619 476 aaKnown RBP11.91□□□□□ -0.5
VAMP4-203ENST00000474047 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 LIPNQ5VXI9 398 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 MOB3CQ70IA8 216 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 LRRC29Q8WV35 223 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 ITPKCQ96DU7 683 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 RDH12Q96NR8 316 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 RNPEPL1Q9HAU8 725 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 G6PC2Q9NQR9 355 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 C8orf4Q9NR00 106 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 METRNQ9UJH8 293 aa11.91□□□□□ -0.5
VAMP4-203ENST00000474047 A0A1B0GVI7 797 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 OOEPA6NGQ2 149 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 F5H0A9 414 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-203ENST00000474047 P2RY10O00398 339 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 CDIPTO14735 213 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 SRSF10O75494 262 aaKnown RBP11.9□□□□□ -0.5
VAMP4-203ENST00000474047 FAHP16930 419 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 PITPNBP48739 271 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 CSNK2BP67870 215 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-203ENST00000474047 ZNF154Q13106 437 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 TP53I3Q53FA7 332 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 CEP78Q5JTW2 689 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 PLCXD3Q63HM9 321 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 ENTHD1Q8IYW4 607 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 CYGBQ8WWM9 190 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 METTL17Q9H7H0 456 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-203ENST00000474047 PLEKHA1Q9HB21 404 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 CLN8Q9UBY8 286 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 SLC22A13Q9Y226 551 aa11.9□□□□□ -0.5
VAMP4-203ENST00000474047 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 SLC16A6O15403 523 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 NDUFA2O43678 99 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 NRASP01111 189 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 GPM6AP51674 278 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF85Q03923 595 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 MICBQ29980 383 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF684Q5T5D7 378 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ZBTB37Q5TC79 503 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 DOK3Q7L591 496 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ACBD7Q8N6N7 88 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 RHOXF1Q8NHV9 184 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
VAMP4-203ENST00000474047 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ERVK-18Q9QC07 812 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ARHGAP32A7KAX9 2087 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 IGHV3OR15-7A0A075B7D8 119 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 PPIAL4CA0A0B4J2A2 164 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF732B4DXR9 585 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 E9PQ18 207 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 ADAM20O43506 726 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 SYT7O43581 403 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 FADS2O95864 444 aaKnown RBP11.89□□□□□ -0.51
VAMP4-203ENST00000474047 THBS2P35442 1172 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 PSMB10P40306 273 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 GMFBP60983 142 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 GNG3P63215 75 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 CEACAM21Q3KPI0 293 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 CATSPERDQ86XM0 798 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 GCSAMQ8N6F7 178 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 OR5A2Q8NGI9 324 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 NANPQ8TBE9 248 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 RORBQ92753 470 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 LGALS12Q96DT0 336 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 AMBNQ9NP70 447 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 DNAJB11Q9UBS4 358 aa11.89□□□□□ -0.51
VAMP4-203ENST00000474047 RPL36Q9Y3U8 105 aaKnown RBP11.89□□□□□ -0.51
VAMP4-203ENST00000474047 LOC105371242A0A075B767 164 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 A8MXK9 166 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 H3BSH0 61 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 J3QLW9 94 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 IGLV3-1P01715 115 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 GYPAP02724 150 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 DBTP11182 482 aaKnown RBP11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF19P17023 458 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ACTA2P62736 377 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ACTG2P63267 376 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 HOXA4Q00056 320 aaPredicted RBP11.88□□□□□ -0.51
VAMP4-203ENST00000474047 ZNF91Q05481 1191 aa11.88□□□□□ -0.51
VAMP4-203ENST00000474047 DMRTC1Q5HYR2 192 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms