RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 SLC18B1Q6NT16 456 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 CEACAM19Q7Z692 300 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 OR10H5Q8NGA6 315 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 DMRTA2Q96SC8 542 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 OPA3Q9H6K4 179 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 CALHM2Q9HA72 323 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 GP6Q9HCN6 339 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 NPDC1Q9NQX5 325 aaPredicted RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 CLEC4AQ9UMR7 237 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 FREM1Q5H8C1 2179 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SVILO95425 2214 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 GPR37O15354 613 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SLC31A2O15432 143 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SIX6O95475 246 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 CD1AP06126 327 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 GIFP27352 417 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 PITPNBP48739 271 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 TAS2R60P59551 318 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 SEC61A1P61619 476 aaKnown RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 EGR3Q06889 387 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 KCNMB1Q16558 191 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 RIPPLY2Q5TAB7 128 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 FOXL2NBQ6ZUU3 175 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 P4HA3Q7Z4N8 544 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 PUSL1Q8N0Z8 303 aaKnown RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 GPR137CQ8N3F9 429 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 ZNF843Q8N446 348 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 ASB17Q8WXJ9 295 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 TRIB1Q96RU8 372 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 AMELYQ99218 206 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 PFDN5Q99471 154 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 RBM24Q9BX46 236 aaKnown RBP12.98□□□□□ -0.33
LMNA-213ENST00000473598 GNG8Q9UK08 70 aa12.98□□□□□ -0.33
LMNA-213ENST00000473598 DOCK7Q96N67 2140 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 CACNA1CQ13936 2221 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 AHRRA9YTQ3 701 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 PSMD9O00233 223 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 POU3F4P49335 361 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 ZNF84P51523 738 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 EIF2B1Q14232 305 aaKnown RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 SLC36A2Q495M3 483 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 RPL22L1Q6P5R6 122 aaKnown RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 ZNF837Q96EG3 531 aaPredicted RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 ABHD6Q9BV23 337 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 LINC00470Q9BZP3 86 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 SLCO5A1Q9H2Y9 848 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 PIGMQ9H3S5 423 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 CRLF2Q9HC73 371 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 TCF7L1Q9HCS4 588 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 TAS2R3Q9NYW6 316 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 PIPOXQ9P0Z9 390 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
LMNA-213ENST00000473598 CBY1Q9Y3M2 126 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
LMNA-213ENST00000473598 A0A1B0GUH1 482 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 EEF1E1O43324 174 aaKnown RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 OR2A4O95047 310 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 GUCA1AP43080 201 aaPredicted RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 SMCO1Q147U7 214 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 TSPO2Q5TGU0 170 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 ZNF660Q6AZW8 331 aaPredicted RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 TMEM88Q6PEY1 159 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 LINGO2Q7L985 606 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 LINC00346Q8IVM7 164 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 TOMM5Q8N4H5 51 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 CISD2Q8N5K1 135 aaKnown RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 GMPPAQ96IJ6 420 aaPredicted RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 ALKBH3Q96Q83 286 aaPredicted RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 OR2A7Q96R45 310 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 NELFAQ9H3P2 528 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 GLRX2Q9NS18 164 aa12.96□□□□□ -0.33
LMNA-213ENST00000473598 MRM2Q9UI43 246 aaKnown RBP12.96□□□□□ -0.33
LMNA-213ENST00000473598 TACSTD2P09758 323 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 OR8G3PP0DMU2 310 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 EDNRAP25101 427 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 AGTR1P30556 359 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 RPS11P62280 158 aaKnown RBP eCLIP12.96□□□□□ -0.34
LMNA-213ENST00000473598 KCTD18Q6PI47 426 aaPredicted RBP12.96□□□□□ -0.34
LMNA-213ENST00000473598 SSX9Q7RTT3 188 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 FAM220AQ7Z4H9 259 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 DCXRQ7Z4W1 244 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 OR13C5Q8NGS8 318 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.34
LMNA-213ENST00000473598 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 ST7LQ8TDW4 575 aa12.96□□□□□ -0.34
LMNA-213ENST00000473598 A0A1B0GV90 55 aa12.95□□□□□ -0.34
LMNA-213ENST00000473598 SS18L1O75177 396 aaPredicted RBP12.95□□□□□ -0.34
LMNA-213ENST00000473598 ABHD16AO95870 558 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms