RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 NDUFB7P17568 137 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 RHCEP18577 417 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 ACKR3P25106 362 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 TMEM219Q86XT9 240 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 OR8D4Q8NGM9 314 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 FAM162AQ96A26 154 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 REEP6Q96HR9 211 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 DMRTB1Q96MA1 342 aa10.2□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF593O00488 134 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 SIGLEC5O15389 551 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 XPNPEP2O43895 674 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 ACAA1P09110 424 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 DCTDP32321 178 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 GRK5P34947 590 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 MSX2P35548 267 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 GSSP48637 474 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 CX3CR1P49238 355 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 GSK3AP49840 483 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 GFOD2Q3B7J2 385 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 FAM57BQ71RH2 274 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 NDUFA11Q86Y39 141 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 Q8N2B8 174 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 PROKR2Q8NFJ6 384 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 HPSE2Q8WWQ2 592 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 C12orf43Q96C57 262 aaKnown RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 PAPOLGQ9BWT3 736 aaKnown RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 CDCA4Q9BXL8 241 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 WNT10AQ9GZT5 417 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 RANBP3Q9H6Z4 567 aaPredicted RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 BRD7Q9NPI1 651 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 FGFR1OP2Q9NVK5 253 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 KCNG2Q9UJ96 466 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF222Q9UK12 451 aa10.19□□□□□ -0.78
TRAF4-209ENST00000473421 SF3B6Q9Y3B4 125 aaKnown RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 FAM32AQ9Y421 112 aaKnown RBP10.19□□□□□ -0.78
TRAF4-209ENST00000473421 DHRS12A0PJE2 317 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 OR2AT4A6NND4 320 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF850A8MQ14 1090 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 H0YAE9 185 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 XRCC2O43543 280 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 SEMG1P04279 462 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 COX7A1P24310 79 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 POU1F1P28069 291 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 DDOSTP39656 456 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 CAV3P56539 151 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 BLCAPP62952 87 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 TCTEX1D4Q5JR98 221 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 PGBD2Q6P3X8 592 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 C11orf88Q6PI97 169 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 FAM185AQ8N0U4 392 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 SLC37A3Q8NCC5 494 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 OR4S1Q8NGB4 309 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 LYZL4Q96KX0 146 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 SIKE1Q9BRV8 207 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 DNAJC27Q9NZQ0 273 aa10.18□□□□□ -0.78
TRAF4-209ENST00000473421 MEX3AA1L020 520 aaKnown RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 ANXA2P07355 339 aaKnown RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 PSG2P11465 335 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 CCL3L1P16619 93 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 NAA10P41227 235 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 GABRA2P47869 451 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 EMX1Q04741 257 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 MZT1Q08AG7 82 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 PRDX4Q13162 271 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 CRMP1Q14194 572 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 TAF13Q15543 124 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 MAPRE2Q15555 327 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 TIGD6Q17RP2 521 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 FAM76BQ5HYJ3 339 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 DEFB121Q5J5C9 76 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 TMEM200BQ69YZ2 307 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 RNF148Q8N7C7 305 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 OR5P3Q8WZ94 311 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 YY1AP1Q9H869 796 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 DCAF13Q9NV06 445 aaKnown RBP10.17□□□□□ -0.78
TRAF4-209ENST00000473421 NLKQ9UBE8 527 aa10.17□□□□□ -0.78
TRAF4-209ENST00000473421 A6NDX4 124 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 NKX6-3A6NJ46 265 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 FAM90A8PA6NJQ4 464 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF878C9JN71 531 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 IDH3BO43837 385 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 GADD45GO95257 159 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 COX4I1P13073 169 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
TRAF4-209ENST00000473421 ENTPD1P49961 510 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 SPIBQ01892 262 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 AANATQ16613 207 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 LINC01590Q5TEZ4 76 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 GLYATQ6IB77 296 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 ZNF782Q6ZMW2 699 aaPredicted RBP10.16□□□□□ -0.78
TRAF4-209ENST00000473421 CD177Q8N6Q3 437 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 TMEM185AQ8NFB2 350 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 OR4F17Q8NGA8 305 aa10.16□□□□□ -0.78
TRAF4-209ENST00000473421 OR4M1Q8NGD0 313 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms