RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 DUSP15Q9H1R2 295 aaPredicted RBP12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF304Q9HCX3 659 aa12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 SERINC1Q9NRX5 453 aa12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 REV3LO60673 3130 aa12.57□□□□□ -0.4
NHLRC3-204ENST00000473371 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 PMS2P1A4D2B8 440 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 IFNA2P01563 188 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 S100A8P05109 93 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 CDAP32320 146 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 PTGER4P35408 488 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 LANCL3Q6ZV70 420 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 GPR27Q9NS67 375 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 JTBO76095 146 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FBXW4P57775 412 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FOXF1Q12946 379 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 TSC22D1Q15714 1073 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 ZDHHC12Q96GR4 267 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 EGLN1Q9GZT9 426 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF319Q9P2F9 582 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 LSM5Q9Y4Y9 91 aaKnown RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 VSTM2BA6NLU5 285 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FAM157AC9JC47 383 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 ADAM10O14672 748 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 TSPAN15O95858 294 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FABP1P07148 127 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 PAX6P26367 422 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 BLVRBP30043 206 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 THEM4Q5T1C6 240 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 SHISA6Q6ZSJ9 500 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FAM57BQ71RH2 274 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 PNLDC1Q8NA58 520 aaKnown RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 FNDC9Q8TBE3 224 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 RHBDD1Q8TEB9 315 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 MVB12AQ96EY5 273 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 NAA11Q9BSU3 229 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 VN1R1Q9GZP7 353 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 RPH3AQ9Y2J0 694 aaPredicted RBP12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 TIMM10BQ9Y5J6 103 aa12.56□□□□□ -0.4
NHLRC3-204ENST00000473371 IGHV3-20A0A0C4DH32 117 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 C5orf52A6NGY3 159 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 LIPT2A6NK58 231 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 C17orf67Q0P5P2 114 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 HMGN3Q15651 99 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 CARD17Q5XLA6 110 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 GKN2Q86XP6 184 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF561Q8N587 486 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF283Q8N7M2 679 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF701Q9NV72 531 aaPredicted RBP12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 ALKBH4Q9NXW9 302 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 SCGB1D2O95969 90 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF44P15621 663 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 TMEM33P57088 247 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 GABREP78334 506 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 OPN5Q6U736 354 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 C7orf61Q8IZ16 206 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 OR1L3Q8NH93 324 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 RGCCQ9H4X1 137 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 KLHL13Q9P2N7 655 aa12.55□□□□□ -0.4
NHLRC3-204ENST00000473371 M0R036 132 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 OPN1LWP04000 364 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ANOS1P23352 680 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ACY1Q03154 408 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 MFAP5Q13361 173 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 LCN10Q6JVE6 187 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 UEVLDQ8IX04 471 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 TCEAL3Q969E4 200 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 PRRX2Q99811 253 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 CD207Q9UJ71 328 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 A0A1W2PPC4 97 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 UBE2CO00762 179 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 RER1O15258 196 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 IFNA21P01568 189 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 MT-ND4LP03901 98 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 HPNP05981 417 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF17P17021 662 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 RNF4P78317 190 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 HYAL1Q12794 435 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 RNF212Q495C1 297 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 DOK3Q7L591 496 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 FBXO17Q96EF6 278 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 ZNF251Q9BRH9 671 aa12.54□□□□□ -0.4
NHLRC3-204ENST00000473371 PECRQ9BY49 303 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms