RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
MRPL55-226ENST00000473066 GYPAP02724 150 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 KRT8P05787 483 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 ACKR3P25106 362 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 PSMB10P40306 273 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 EGR3Q06889 387 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 WDR82Q6UXN9 313 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 WDR86Q86TI4 376 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 C22orf15Q8WYQ4 148 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 RNF170Q96K19 258 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 LYZL4Q96KX0 146 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
MRPL55-226ENST00000473066 MS4A7Q9GZW8 240 aaPredicted RBP13□□□□□ -0.33
MRPL55-226ENST00000473066 GPR84Q9NQS5 396 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 HAO2Q9NYQ3 351 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 DNAJB11Q9UBS4 358 aa13□□□□□ -0.33
MRPL55-226ENST00000473066 IGHV3OR15-7A0A075B7D8 119 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 EI24O14681 340 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 CDIPTO14735 213 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-226ENST00000473066 EGR1P18146 543 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 HTR1FP30939 366 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-226ENST00000473066 PAX8Q06710 450 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 RIPPLY1Q0D2K3 151 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 SLC36A1Q7Z2H8 476 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 FAM90A1Q86YD7 464 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-226ENST00000473066 YIPF7Q8N8F6 280 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 OR10Z1Q8NGY1 313 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 OR51E1Q8TCB6 317 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 OR5P3Q8WZ94 311 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 TBX5Q99593 518 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 APOL4Q9BPW4 351 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 CTSZQ9UBR2 303 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 ENPP5Q9UJA9 477 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 R4GMQ9 66 aa12.99□□□□□ -0.33
MRPL55-226ENST00000473066 KIR2DS1A0A191URI9 304 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PRR32B1ATL7 298 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 TMPRSS2O15393 492 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 DHRS3O75911 302 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 POLR2IP36954 125 aaKnown RBP12.98□□□□□ -0.33
MRPL55-226ENST00000473066 GMFBP60983 142 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 GNG3P63215 75 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 EFNB1P98172 346 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PAX2Q02962 417 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 MFGE8Q08431 387 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-226ENST00000473066 TMED1Q13445 227 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 ZBTB37Q5TC79 503 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PLCXD3Q63HM9 321 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 FAM220AQ7Z4H9 259 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PNLDC1Q8NA58 520 aaKnown RBP12.98□□□□□ -0.33
MRPL55-226ENST00000473066 OR10H4Q8NGA5 316 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 ST8SIA4Q92187 359 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 RPL3LQ92901 407 aaKnown RBP12.98□□□□□ -0.33
MRPL55-226ENST00000473066 UPRTQ96BW1 309 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 TLNRD1Q9H1K6 362 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PPP1R3EQ9H7J1 279 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 USE1Q9NZ43 259 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 SNX5Q9Y5X3 404 aa12.98□□□□□ -0.33
MRPL55-226ENST00000473066 OR5B21A6NL26 309 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 C22orf46C9J442 243 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 HAX1O00165 279 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 LHBP01229 141 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 TTRP02766 147 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 ALPLP05186 524 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 LIPFP07098 398 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 OR2T7P0C7T2 308 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 FAHP16930 419 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 MTNR1AP48039 350 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 ALDH3A2P51648 485 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 GPM6AP51674 278 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 FGF12P61328 243 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 CEP78Q5JTW2 689 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF684Q5T5D7 378 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 GPR157Q5UAW9 335 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF841Q6ZN19 808 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 MOB3CQ70IA8 216 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 C11orf53Q8IXP5 236 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 HPSE2Q8WWQ2 592 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
MRPL55-226ENST00000473066 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF69Q9UC07 566 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 OR52A1Q9UKL2 312 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
MRPL55-226ENST00000473066 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
MRPL55-226ENST00000473066 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 SNTNA6NMZ2 147 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 ZNF732B4DXR9 585 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 H3BNX3 289 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 DVL1O14640 695 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 NDUFB3O43676 98 aa12.96□□□□□ -0.33
MRPL55-226ENST00000473066 RPP14O95059 124 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms