RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ALOX5APP20292 161 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 MDKP21741 143 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-203ENST00000472892 ACKR3P25106 362 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 TGM4P49221 684 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 CDONQ4KMG0 1287 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L9Q6RFH8 374 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-203ENST00000472892 KRT74Q7RTS7 529 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 FGFRL1Q8N441 504 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 PAPD5Q8NDF8 572 aaKnown RBP12.62□□□□□ -0.39
VTI1A-203ENST00000472892 OR10Z1Q8NGY1 313 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 SEH1LQ96EE3 360 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 LYZL4Q96KX0 146 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 RTL8AQ9BWD3 113 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 NIPAL2Q9H841 368 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 YY1AP1Q9H869 796 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4Q9UBX2 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 ZNF391Q9UJN7 358 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 KLHDC2Q9Y2U9 406 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 KPTNQ9Y664 436 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 POMT1Q9Y6A1 747 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 PKD1L1Q8TDX9 2849 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 A0A1B0GUS0 222 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 TMEM210A6NLX4 147 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 ZNF850A8MQ14 1090 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 OMGP23515 440 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 PSMA6P60900 246 aaKnown RBP12.61□□□□□ -0.39
VTI1A-203ENST00000472892 PRDX4Q13162 271 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 TMEM236Q5W0B7 351 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 FIP1L1Q6UN15 594 aaKnown RBP12.61□□□□□ -0.39
VTI1A-203ENST00000472892 TRPM8Q7Z2W7 1104 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 SCCPDHQ8NBX0 429 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 OR8B12Q8NGG6 310 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 PIGCQ92535 297 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 LHX4Q969G2 390 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 TEX12Q9BXU0 123 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 CHIAQ9BZP6 476 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 FGF23Q9GZV9 251 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-203ENST00000472892 DNTTIP1Q9H147 329 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 SLC25A19Q9HC21 320 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
VTI1A-203ENST00000472892 A0A1B0GVI7 797 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 TCRBV3S1A0A5B6 114 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 GYG2O15488 501 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 NDUFB3O43676 98 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 FKBP6O75344 327 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 HCCSP53701 268 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 CBX1P83916 185 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 FLOT2Q14254 428 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 DNAL1Q4LDG9 190 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 STUMQ69YW2 141 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 DEGS2Q6QHC5 323 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 SPATA24Q86W54 205 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 FAM216BQ8N7L0 139 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
VTI1A-203ENST00000472892 ITFG2Q969R8 447 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 NRBF2Q96F24 287 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 RNF170Q96K19 258 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 RAB3IPQ96QF0 476 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-203ENST00000472892 TEAD3Q99594 435 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 PKP2Q99959 881 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 WDR13Q9H1Z4 485 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 C1RLQ9NZP8 487 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 LAMP5Q9UJQ1 280 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 LRP12Q9Y561 859 aa12.6□□□□□ -0.39
VTI1A-203ENST00000472892 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 NDUFA7O95182 113 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 CRYBA1P05813 215 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 DCTDP32321 178 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 CRISP1P54107 249 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
VTI1A-203ENST00000472892 RELBQ01201 579 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 APOFQ13790 326 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 SNAPC1Q16533 368 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-203ENST00000472892 ZNF788Q6ZQV5 615 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 VMO1Q7Z5L0 202 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 KRT77Q7Z794 578 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 OR5T2Q8NGG2 359 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 OR4F5Q8NH21 305 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 HPSE2Q8WWQ2 592 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 DNAJC9Q8WXX5 260 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-203ENST00000472892 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 BEX1Q9HBH7 125 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 FAM206AQ9NX38 181 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 TVP23BQ9NYZ1 205 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 POMPQ9Y244 141 aa12.59□□□□□ -0.39
VTI1A-203ENST00000472892 MEGF8Q7Z7M0 2845 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms