RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TGFAP01135 160 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 ISG15P05161 165 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 PPIAL4FP0DN26 164 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 PCMT1P22061 227 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 CCL1P22362 96 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 GBX2P52951 348 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 MPPED2Q15777 294 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 CEACAM21Q3KPI0 293 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 WDR38Q5JTN6 314 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 CLVS2Q5SYC1 327 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 PRAMEF6Q5VXH4 476 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 Q6ZSR3 168 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 KCTD8Q6ZWB6 473 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 OR1M1Q8NGA1 313 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 OR5A2Q8NGI9 324 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 OR2G2Q8NGZ5 317 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 FBLIM1Q8WUP2 373 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 DVL3Q92997 716 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 MSI2Q96DH6 328 aaKnown RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 PELI1Q96FA3 418 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 TMEM80Q96HE8 168 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 RNF170Q96K19 258 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 TECTBQ96PL2 329 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 SOX7Q9BT81 388 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 YAE1D1Q9NRH1 226 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 UBAP1Q9NZ09 502 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 CNOT2Q9NZN8 540 aaKnown RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 KCNS2Q9ULS6 477 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 CAB39Q9Y376 341 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-211ENST00000472490 PPIAL4AQ9Y536 164 aa11.96□□□□□ -0.49
BRCA1-211ENST00000472490 VPS13CQ709C8 3753 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 A0A1B0GTI1 187 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 OR5B21A6NL26 309 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 SERPINA3P01011 423 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 CCDC159P0C7I6 412 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 PIPP12273 146 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-211ENST00000472490 FAHP16930 419 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 IL2RGP31785 369 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 PSMB10P40306 273 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 LMO4P61968 165 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 GNG3P63215 75 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 KRTAP1-1Q07627 177 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF154Q13106 437 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 ODF4Q2M2E3 257 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 FAM76BQ5HYJ3 339 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 OR14K1Q8NGZ2 314 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 OR51F2Q8NH61 342 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 PLCXD1Q9NUJ7 323 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 C1orf123Q9NWV4 160 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
BRCA1-211ENST00000472490 RTTNQ86VV8 2226 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 HIVEP1P15822 2718 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM212A6NML5 194 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 WNT9BO14905 357 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 LMX1BO60663 402 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 IGHV2-5P01817 119 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 MSMBP08118 114 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF16P17020 682 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-211ENST00000472490 CFHR2P36980 270 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 PMELP40967 661 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 TGM4P49221 684 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ST3GAL4Q11206 333 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ALKBH1Q13686 389 aaKnown RBP11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 CCDC58Q4VC31 144 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 CEP78Q5JTW2 689 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 IZUMO2Q6UXV1 221 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 NLRC3Q7RTR2 1065 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 STX19Q8N4C7 294 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF676Q8N7Q3 588 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 BPIFB6Q8NFQ5 453 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF649Q9BS31 505 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 COMMD4Q9H0A8 199 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 TLNRD1Q9H1K6 362 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 DCAF16Q9NXF7 216 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 SCN3BQ9NY72 215 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 HHLA2Q9UM44 414 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 F8P00451 2351 aa11.94□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF469Q96JG9 3925 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-211ENST00000472490 LOC107986453A0A1B0GWG9 222 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 NDUFA2O43678 99 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 FOXH1O75593 365 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
BRCA1-211ENST00000472490 LIMS3P0CW19 117 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 LIMS4P0CW20 117 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 GPM6AP51674 278 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-211ENST00000472490 ZNF404Q494X3 552 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
BRCA1-211ENST00000472490 GLCCI1Q86VQ1 547 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms