RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 OR5T2Q8NGG2 359 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 OR5P3Q8WZ94 311 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 PPP1R14AQ96A00 147 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SLC25A28Q96A46 364 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 WDFY2Q96P53 400 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 PKP2Q99959 881 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SIRPDQ9H106 197 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 TLNRD1Q9H1K6 362 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SP140LQ9H930 580 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 RNPEPL1Q9HAU8 725 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 TRIM36Q9NQ86 728 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 PAPOLBQ9NRJ5 636 aaKnown RBP12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SNTG1Q9NSN8 517 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 LAMP5Q9UJQ1 280 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SRRM5B3KS81 715 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 CLDN34H7C241 214 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 CRISP1P54107 249 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 MFGE8Q08431 387 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-203ENST00000471344 IKZF1Q13422 519 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 MICBQ29980 383 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 CD276Q5ZPR3 534 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 STUMQ69YW2 141 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 KRT77Q7Z794 578 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 GALNT4Q8N4A0 578 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 CSNK2A3Q8NEV1 391 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 PIGCQ92535 297 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 LHX4Q969G2 390 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 MICU1Q9BPX6 476 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 RGCCQ9H4X1 137 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 ZMAT3Q9HA38 289 aaKnown RBP12.68□□□□□ -0.38
COL1A1-203ENST00000471344 FAM206AQ9NX38 181 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 KAAG1Q9UBP8 84 aa12.68□□□□□ -0.38
COL1A1-203ENST00000471344 RPUSD1Q9UJJ7 312 aaKnown RBP12.68□□□□□ -0.38
COL1A1-203ENST00000471344 EBAG9O00559 213 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 MAGEB4O15481 346 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-203ENST00000471344 AKR7A2O43488 359 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 NDUFA2O43678 99 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 CST4P01036 141 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 MDKP21741 143 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-203ENST00000471344 FOXL1Q12952 345 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 PTGES3Q15185 160 aaKnown RBP12.67□□□□□ -0.38
COL1A1-203ENST00000471344 CEP78Q5JTW2 689 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 KCTD8Q6ZWB6 473 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 DNAJC9Q8WXX5 260 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 NRBF2Q96F24 287 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 TEAD3Q99594 435 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 UNKLQ9H9P5 680 aaKnown RBP12.67□□□□□ -0.38
COL1A1-203ENST00000471344 DNAJB11Q9UBS4 358 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 MPC1Q9Y5U8 109 aa12.67□□□□□ -0.38
COL1A1-203ENST00000471344 ANXA2P2A6NMY6 339 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 P2RY10O00398 339 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-203ENST00000471344 RHBDL1O75783 438 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 MELTFP08582 738 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-203ENST00000471344 DCTDP32321 178 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 GPM6AP51674 278 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 IL5RAQ01344 420 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 KPNB1Q14974 876 aaKnown RBP12.66□□□□□ -0.38
COL1A1-203ENST00000471344 PLEKHG7Q6ZR37 379 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 ZDHHC23Q8IYP9 409 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 PNLDC1Q8NA58 520 aaKnown RBP12.66□□□□□ -0.38
COL1A1-203ENST00000471344 ZDHHC16Q969W1 377 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 RNF170Q96K19 258 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 FAM71F1Q96KD3 344 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-203ENST00000471344 TEX12Q9BXU0 123 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 CHIAQ9BZP6 476 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 YIPF3Q9GZM5 350 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 SEMA6AQ9H2E6 1030 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 PRDM13Q9H4Q3 707 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 NIPAL2Q9H841 368 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
COL1A1-203ENST00000471344 IGHV1-69DA0A0B4J2H0 117 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 A0A0U1RQK1 487 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 TMEM269A0A1B0GVZ9 245 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 FAM181BA6NEQ2 426 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 IGHV1-69P01742 117 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 LIPFP07098 398 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 C16orf87Q6PH81 154 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 Q6YL49 198 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 VMO1Q7Z5L0 202 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 AMIGO2Q86SJ2 522 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 OR5K1Q8NHB7 308 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 FAM81AQ8TBF8 368 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 OR51E1Q8TCB6 317 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 DUS3LQ96G46 650 aaKnown RBP12.65□□□□□ -0.38
COL1A1-203ENST00000471344 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 RAB3IPQ96QF0 476 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-203ENST00000471344 OR8B4Q96RC9 309 aa12.65□□□□□ -0.38
COL1A1-203ENST00000471344 PBOV1Q9GZY1 135 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms