RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 POLR3KQ9Y2Y1 108 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 MDC1Q14676 2089 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 FANCMQ8IYD8 2048 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CACNA1IQ9P0X4 2223 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 A0A087WWC5 75 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ZNF320A2RRD8 509 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 FAM221AA4D161 298 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 HSBP1L1C9JCN9 74 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 H7C1C5 153 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SDCBPO00560 298 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 HSD17B6O14756 317 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ERI3O43414 337 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 SFT2D2O95562 160 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 IFNA21P01568 189 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GAPDHP04406 335 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 CD1AP06126 327 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GSTP1P09211 210 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 SEC11BP0C7V7 166 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ZNF708P17019 499 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 PSMB5P28074 263 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 OR10J1P30954 320 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ZNF41P51814 821 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 SCAND1P57086 179 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ERVS71-1P61550 626 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 LCN6P62502 163 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 DUSP2Q05923 314 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 RAB35Q15286 201 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TAF9Q16594 264 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SAMD5Q5TGI4 173 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SLC35E3Q7Z769 313 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ADGRE4PQ86SQ3 457 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CMTM1Q8IZ96 169 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 OR9A4Q8NGU2 314 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 OR2G3Q8NGZ4 309 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 RNF128Q8TEB7 428 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GLYATL1Q969I3 302 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 PPP1R14AQ96A00 147 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 MRGPRFQ96AM1 343 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CNRIP1Q96F85 164 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 SLC25A44Q96H78 314 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 MS4A10Q96PG2 267 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CIB3Q96Q77 187 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 NMNAT2Q9BZQ4 307 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GLRX2Q9NS18 164 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 DNAJB12Q9NXW2 375 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 MRM2Q9UI43 246 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 PADI3Q9ULW8 664 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SLC22A13Q9Y226 551 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 FUT9Q9Y231 359 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 KLHDC2Q9Y2U9 406 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 STRAPQ9Y3F4 350 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 MTCH2Q9Y6C9 303 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ZNF780BQ9Y6R6 833 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 IGLV3-16A0A075B6K0 115 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TRAV34A0A0B4J273 112 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 A6NCN8 305 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TMEM212A6NML5 194 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 C4orf47A7E2U8 309 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TGFBR3LH3BV60 316 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 J3QW42 95 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CCL25O15444 150 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GPR137BO60478 399 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 DNAJB6O75190 326 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 STC2O76061 302 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 RAC2P15153 192 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ALOX5APP20292 161 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 BCKDHBP21953 392 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 GLRA1P23415 457 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 OMGP23515 440 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ZNF136P52737 540 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 DCAF7P61962 342 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SNRPD1P62314 119 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 SP3Q02447 781 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 CEBPEQ15744 281 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 KCNMB1Q16558 191 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ALG10BQ5I7T1 473 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TPGS2Q68CL5 300 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SLC25A24Q6NUK1 477 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SLC16A9Q7RTY1 509 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 NUFIP2Q7Z417 695 aaKnown RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 GRASPQ7Z6J2 395 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 LYPD6BQ8NI32 183 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 WBP2Q969T9 261 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ANKRD9Q96BM1 317 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 NUDT11Q96G61 164 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TECTBQ96PL2 329 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 LPAR4Q99677 370 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 ABHD14AQ9BUJ0 271 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 NUDT9Q9BW91 350 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SCRT1Q9BWW7 348 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 C5orf66Q9H5L9 145 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 C6orf106Q9H6K1 298 aaPredicted RBP3.76□□□□□ -1.81
VPS50-210ENST00000471188 MSL2Q9HCI7 577 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 TAS2R4Q9NYW5 299 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 FLRT3Q9NZU0 649 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 AK3Q9UIJ7 227 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 VAX2Q9UIW0 290 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 SRPK3Q9UPE1 567 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 KCNK6Q9Y257 313 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 RFNGQ9Y644 331 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms