RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 DRAM2Q6UX65 266 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 ZNF782Q6ZMW2 699 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 ZNF788Q6ZQV5 615 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 SLC16A9Q7RTY1 509 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 RNF144BQ7Z419 303 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 DCXRQ7Z4W1 244 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 CYP4Z1Q86W10 505 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 DTX3Q8N9I9 347 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 PAPD5Q8NDF8 572 aaKnown RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 OR8J3Q8NGG0 315 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 OR51L1Q8NGJ5 315 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 OR52J3Q8NH60 311 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 FANK1Q8TC84 345 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 RCC1LQ96I51 464 aaKnown RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 HSH2DQ96JZ2 352 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 DMRTB1Q96MA1 342 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 RAB3IPQ96QF0 476 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 GPX7Q96SL4 187 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 IFT27Q9BW83 186 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 CHID1Q9BWS9 393 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 PAPOLGQ9BWT3 736 aaKnown RBP7.36□□□□□ -1.23
CCDC171-204ENST00000470191 TMBIM4Q9HC24 238 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 BRD7Q9NPI1 651 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 C19orf12Q9NSK7 152 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 RHBDD3Q9Y3P4 386 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 U3KQK5 164 aa7.36□□□□□ -1.23
CCDC171-204ENST00000470191 TRBV4-1A0A0J9YWV2 114 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 MEX3AA1L020 520 aaKnown RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 OR2AT4A6NND4 320 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 GSTA4O15217 222 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 SIGLEC5O15389 551 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 XRCC2O43543 280 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 SYNGR1O43759 233 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 GLCEO94923 617 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 DIRAS1O95057 198 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 H1F0P07305 194 aaKnown RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 ACAA1P09110 424 aaPredicted RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 SPARCP09486 303 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 OMPP47874 163 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 CAV3P56539 151 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 FAM3AP98173 230 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 SEC23BQ15437 767 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 ATPAF1Q5TC12 328 aaPredicted RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 AGBL2Q5U5Z8 902 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 CENPVQ7Z7K6 275 aaPredicted RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 ZDHHC21Q8IVQ6 265 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 Q8N2B8 174 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 CYB561A3Q8NBI2 242 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 PROKR2Q8NFJ6 384 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 OR4M1Q8NGD0 313 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 ANGPTL6Q8NI99 470 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 WIPF2Q8TF74 440 aaPredicted RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 TSPEARQ8WU66 669 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 DPF1Q92782 380 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 C12orf43Q96C57 262 aaKnown RBP7.35□□□□□ -1.23
CCDC171-204ENST00000470191 SLAMF6Q96DU3 332 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 REEP6Q96HR9 211 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 MICU1Q9BPX6 476 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 OR52D1Q9H346 318 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 YY1AP1Q9H869 796 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 HEXA-AS1Q9H8Q6 139 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 INPP5EQ9NRR6 644 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 DNAJC27Q9NZQ0 273 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 TCF19Q9Y242 345 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
CCDC171-204ENST00000470191 A0A0G2JND7 137 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 A6NDX4 124 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ZNF850A8MQ14 1090 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 CXCR6O00574 342 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 TIPRLO75663 272 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 SERPINA1P01009 418 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ARG1P05089 322 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 CCL3L1P16619 93 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 GLRA1P23415 457 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 SLC6A6P31641 620 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 DDOSTP39656 456 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 CX3CR1P49238 355 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 GSK3AP49840 483 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 MXRA7P84157 204 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 CD83Q01151 205 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCDC171-204ENST00000470191 PRDX4Q13162 271 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 SSX2Q16385 188 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 AANATQ16613 207 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 C10orf99Q6UWK7 81 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 FAM57BQ71RH2 274 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ZBTB46Q86UZ6 589 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 RPS4Y2Q8TD47 263 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ZNRF4Q8WWF5 429 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 MYDGFQ969H8 173 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 SGK3Q96BR1 496 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 KCNJ15Q99712 375 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ASCL2Q99929 193 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 RTL8AQ9BWD3 113 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 DNTTIP1Q9H147 329 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 NLKQ9UBE8 527 aa7.34□□□□□ -1.23
CCDC171-204ENST00000470191 ENPP4Q9Y6X5 453 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms