RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RARRES3Q9UL19 164 aa12□□□□□ -0.49
BRCA1-209ENST00000470026 LY6G6EA0A0G2JKS1 128 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 A0A1W2PQM1 296 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 MSGN1A6NI15 193 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 FIGNL2A6NMB9 653 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 SERPINE3A8MV23 424 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 TLX3O43711 291 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ADAP1O75689 374 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 TSPAN9O75954 239 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ACTL6AO96019 429 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ICAM2P13598 275 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 AMY2BP19961 511 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 IL32P24001 234 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ENDOGQ14249 297 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 PPA1Q15181 289 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 SMAD2Q15796 467 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 CCDC157Q569K6 752 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 LCN10Q6JVE6 187 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 MRPL14Q6P1L8 145 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 SPEM1Q8N4L4 309 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 PNLDC1Q8NA58 520 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ROBO4Q8WZ75 1007 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 CRB3Q9BUF7 120 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 C19orf25Q9UFG5 118 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 U3KQA8 63 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 NCOA6Q14686 2063 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 DHRS3O75911 302 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 MSR1P21757 451 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 DHPSP49366 369 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 SNU13P55769 128 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ARFRP1Q13795 201 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 ARL6IP1Q15041 203 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 SLC9A3R2Q15599 337 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 RSPO1Q2MKA7 263 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 MST1LQ2TV78 715 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 DTX1Q86Y01 620 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 CCDC54Q8NEL0 328 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 OR51T1Q8NGJ9 327 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
BRCA1-209ENST00000470026 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 C10orf35Q96D05 121 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 GPER1Q99527 375 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 PECRQ9BY49 303 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 OR5AC2Q9NZP5 309 aa11.99□□□□□ -0.49
BRCA1-209ENST00000470026 A0A087WZY1 265 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 LOC102723996A0A087X1L8 192 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 HPNP05981 417 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 SFTPDP35247 375 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 CLDN17P56750 224 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PUSL1Q8N0Z8 303 aaKnown RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 BHLHE23Q8NDY6 225 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PP6455Q8WZ26 134 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 ARL11Q969Q4 196 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 DEFB126Q9BYW3 111 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 CHST5Q9GZS9 411 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 NELFAQ9H3P2 528 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 MMP26Q9NRE1 261 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PMS2P1A4D2B8 440 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 CSTBP04080 98 aaKnown RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 CD63P08962 238 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 UBE2V2Q15819 145 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PLEKHN1Q494U1 663 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 NKAPLQ5M9Q1 402 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 PHYHD1Q5SRE7 291 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 RTL6Q6ICC9 239 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 GUSBP11Q6P575 273 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 IL34Q6ZMJ4 242 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 SVBPQ8N300 66 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 ESX1Q8N693 406 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 GJC3Q8NFK1 279 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-209ENST00000470026 DECR2Q9NUI1 292 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 CABIN1Q9Y6J0 2220 aa11.98□□□□□ -0.49
BRCA1-209ENST00000470026 SIGLEC6O43699 453 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 PI3P19957 117 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 GLRA1P23415 457 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 BLVRBP30043 206 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 OR3A2P47893 321 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 SUCLG1P53597 346 aaKnown RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 CSNK2A1P68400 391 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 CCL7P80098 99 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 PCOLCEQ15113 449 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 CSNK2A3Q8NEV1 391 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 OR4A4PQ8NGN8 299 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 ADAMTS17Q8TE56 1095 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 TMED6Q8WW62 240 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 HAS2Q92819 552 aa11.97□□□□□ -0.49
BRCA1-209ENST00000470026 SAT2Q96F10 170 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-209ENST00000470026 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms