RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ATPAF1Q5TC12 328 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-210ENST00000469897 KCTD8Q6ZWB6 473 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 RHOUQ7L0Q8 258 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 TMEM179BQ7Z7N9 219 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 ARHGAP24Q8N264 748 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 CSNK2A3Q8NEV1 391 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 OR5P3Q8WZ94 311 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 ITPKCQ96DU7 683 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 RNF170Q96K19 258 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 CLPTM1LQ96KA5 538 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 CCT8L2Q96SF2 557 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 TLNRD1Q9H1K6 362 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 WDR13Q9H1Z4 485 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 SEMA6AQ9H2E6 1030 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 MUC13Q9H3R2 512 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 HAO2Q9NYQ3 351 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 PRPF19Q9UMS4 504 aaKnown RBP10.93□□□□□ -0.66
CPSF4-210ENST00000469897 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
CPSF4-210ENST00000469897 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 A0A1B0GVI7 797 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 ANXA2P2A6NMY6 339 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 PRR23D1E9PI22 279 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-210ENST00000469897 GNGT2O14610 69 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 SELENOFO60613 162 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 PRR23D2P0DMB1 279 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-210ENST00000469897 T-ENOLP0DO92 83 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 RAP2AP10114 183 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 SELLP14151 372 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 ACKR3P25106 362 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 PDLIM3Q53GG5 364 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-210ENST00000469897 LRRC10Q5BKY1 277 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 BRICD5Q6PL45 260 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 LDLRAD3Q86YD5 345 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 CPOQ8IVL8 374 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 Q8N7P7 452 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 OTOSQ8NHW6 89 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 H1FXQ92522 213 aaKnown RBP10.92□□□□□ -0.66
CPSF4-210ENST00000469897 C12orf43Q96C57 262 aaKnown RBP10.92□□□□□ -0.66
CPSF4-210ENST00000469897 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 CITED1Q99966 193 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 DCTN5Q9BTE1 182 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 RGCCQ9H4X1 137 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 ZNF391Q9UJN7 358 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 MPC1Q9Y5U8 109 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
CPSF4-210ENST00000469897 GPR37O15354 613 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 AKR7A2O43488 359 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 CST4P01036 141 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
CPSF4-210ENST00000469897 PRKACGP22612 351 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 TAF9Q16594 264 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 MIDNQ504T8 468 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 STUMQ69YW2 141 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 CMTM4Q8IZR5 234 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 PNKDQ8N490 385 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 FTMTQ8N4E7 242 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 RAB3IPQ96QF0 476 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-210ENST00000469897 HIST1H2AAQ96QV6 131 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 PKP2Q99959 881 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 RTL8AQ9BWD3 113 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 FGF23Q9GZV9 251 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-210ENST00000469897 DPAGT1Q9H3H5 408 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 KLHDC2Q9Y2U9 406 aa10.91□□□□□ -0.66
CPSF4-210ENST00000469897 RNASEK-C17orf49H0YIS7 233 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 HMGN1P05114 100 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 CALB2P22676 271 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
CPSF4-210ENST00000469897 CDK5Q00535 292 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 KLRD1Q13241 179 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 SNCBQ16143 134 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 DGUOKQ16854 277 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 DMRTC1Q5HYR2 192 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 TMEM236Q5W0B7 351 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 ASPHD2Q6ICH7 369 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 Q6ZSV7 163 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 ADGRG5Q8IZF4 528 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 HS3ST5Q8IZT8 346 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 ZSCAN4Q8NAM6 433 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-210ENST00000469897 OR10Z1Q8NGY1 313 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 NPRL2Q8WTW4 380 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 CANT1Q8WVQ1 401 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 CCDC124Q96CT7 223 aaKnown RBP10.9□□□□□ -0.66
CPSF4-210ENST00000469897 ASB9Q96DX5 294 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 MED30Q96HR3 178 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 DMRTB1Q96MA1 342 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 GAFA1Q96PS6 74 aa10.9□□□□□ -0.66
CPSF4-210ENST00000469897 CAB39Q9Y376 341 aaPredicted RBP10.9□□□□□ -0.66
CPSF4-210ENST00000469897 TMEM210A6NLX4 147 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 PSMD9O00233 223 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 NPFFO15130 113 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 RHBDL1O75783 438 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
CPSF4-210ENST00000469897 OSMP13725 252 aa10.89□□□□□ -0.67
CPSF4-210ENST00000469897 NDUFB7P17568 137 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms