RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SERPINA12Q8IW75 414 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5D14Q8NGL3 314 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 Q8TCH9 128 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5P3Q8WZ94 311 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 PIGCQ92535 297 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 FAM168AQ92567 244 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 TIMD4Q96H15 378 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 MEGF10Q96KG7 1140 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 OR2V2Q96R30 315 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 CHST5Q9GZS9 411 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 PPP1R3CQ9UQK1 317 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 LSM2Q9Y333 95 aaKnown RBP10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 ANKRD61A6NGH8 418 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF850A8MQ14 1090 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 LILRA1O75019 489 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 MT-ND2P03891 347 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 IRF2P14316 349 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 PRKACBP22694 351 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 CFHR2P36980 270 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 GTF2A1P52655 376 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 GNG3P63215 75 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 MLLT11Q13015 90 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 MED22Q15528 200 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF773Q6PK81 442 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF367Q7RTV3 350 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 RDH10Q8IZV5 341 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 C1orf87Q8N0U7 546 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 PARP16Q8N5Y8 322 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 DNAAF1Q8NEP3 725 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 OR13C3Q8NGS6 347 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 OR11L1Q8NGX0 322 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 RAB1CQ92928 201 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 ITPKCQ96DU7 683 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 RNF170Q96K19 258 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 NR1H4Q96RI1 486 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 FN3KRPQ9HA64 309 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 GCM1Q9NP62 436 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 ACOT13Q9NPJ3 140 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 SLC7A11Q9UPY5 501 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 DHDHQ9UQ10 334 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 CCDC168Q8NDH2 2452 aa10.7□□□□□ -0.7
SPTLC1-204ENST00000469778 F5H5P2 479 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 NDUFS7O75251 213 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 FAHP16930 419 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF20P17024 532 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 CELP19835 753 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 MAPK3P27361 379 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 FUT6P51993 359 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 EMX1Q04741 257 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 RIN1Q13671 783 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 CNN3Q15417 329 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 ODF4Q2M2E3 257 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF573Q86YE8 665 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 SPARTQ8N0X7 666 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 OR10AD1Q8NGE0 317 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 ITLN1Q8WWA0 313 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 PHYHIPQ92561 330 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 GTF3AQ92664 365 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 SPSB1Q96BD6 273 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 CPNE2Q96FN4 548 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 MGLLQ99685 303 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 PDCD1LG2Q9BQ51 273 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 PIMREGQ9BSJ6 248 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 TLNRD1Q9H1K6 362 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 VCX3AQ9NNX9 186 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 TMEM106BQ9NUM4 274 aa10.69□□□□□ -0.7
SPTLC1-204ENST00000469778 A0A087WXM4 84 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 LRP5LA4QPB2 252 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 CLDN25C9JDP6 229 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 H0YL77 283 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 RP2O75695 350 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 NCR1O76036 304 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 LALBAP00709 142 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ACAA1P09110 424 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 OCM2P0CE71 109 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 CPEP16870 476 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 COL8A2P25067 703 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 Q499Y3 187 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 UBE2UQ5VVX9 321 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 PLCXD3Q63HM9 321 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 MOB3CQ70IA8 216 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF525Q8N782 197 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 OR1M1Q8NGA1 313 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 OR10Z1Q8NGY1 313 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 CCL17Q92583 94 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 SGCDQ92629 289 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 UFD1Q92890 307 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 FGGYQ96C11 551 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 PGLYRP3Q96LB9 341 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 OR5M11Q96RB7 305 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 SOX7Q9BT81 388 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ZCCHC4Q9H5U6 513 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ZNF696Q9H7X3 374 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 CKLFQ9UBR5 152 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 ITGB1BP2Q9UKP3 347 aa10.68□□□□□ -0.7
SPTLC1-204ENST00000469778 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms