RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 C6orf201Q7Z4U5 140 aa16.72■□□□□ 0.27
VIM-203ENST00000469543 OR1S1Q8NH92 325 aa16.72■□□□□ 0.27
VIM-203ENST00000469543 FGFBP3Q8TAT2 258 aa16.72■□□□□ 0.27
VIM-203ENST00000469543 KIF25Q9UIL4 384 aa16.72■□□□□ 0.27
VIM-203ENST00000469543 PINLYPA6NC86 204 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 RNF222A6NCQ9 220 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 CBR3O75828 277 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 LUMP51884 338 aaPredicted RBP16.71■□□□□ 0.27
VIM-203ENST00000469543 CHAF1BQ13112 559 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 HDDC2Q7Z4H3 204 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 BATF2Q8N1L9 274 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 AKR7LQ8NHP1 331 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 TERB2Q8NHR7 220 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 VRK1Q99986 396 aaPredicted RBP16.71■□□□□ 0.27
VIM-203ENST00000469543 GPR173Q9NS66 373 aa16.71■□□□□ 0.27
VIM-203ENST00000469543 C5orf51A6NDU8 294 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 SPRY1O43609 319 aaPredicted RBP16.71■□□□□ 0.26
VIM-203ENST00000469543 CXCL13O43927 109 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 B3GALNT1O75752 331 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 CHRM2P08172 466 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 GABRR1P24046 479 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 CLDN15P56746 228 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 B3GALT5-AS1P59052 145 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 RAC1P63000 192 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 SPINK14Q6IE38 97 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 JMJD6Q6NYC1 403 aaPredicted RBP16.71■□□□□ 0.26
VIM-203ENST00000469543 UNQ6126/PRO20091Q6UXV3 157 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 PPP1R32Q7Z5V6 425 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 HOGA1Q86XE5 327 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 DTWD2Q8NBA8 298 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 OR6K3Q8NGY3 331 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 ZNF845Q96IR2 970 aaPredicted RBP16.71■□□□□ 0.26
VIM-203ENST00000469543 OR10A2Q9H208 303 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 ZNF107Q9UII5 783 aaPredicted RBP16.71■□□□□ 0.26
VIM-203ENST00000469543 GPR160Q9UJ42 338 aa16.71■□□□□ 0.26
VIM-203ENST00000469543 MFNGO00587 321 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 DHRS3O75911 302 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 GLRA1P23415 457 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 HOXA6P31267 233 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 C10orf128Q5T292 105 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 GLRX5Q86SX6 157 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 TMEM230Q96A57 120 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 PHB2Q99623 299 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 MYOZ1Q9NP98 299 aaPredicted RBP16.7■□□□□ 0.26
VIM-203ENST00000469543 FBLN5Q9UBX5 448 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 MED13Q9UHV7 2174 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 PCSK5Q92824 1860 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 A0A087WZY1 265 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 EIF1BO60739 113 aaKnown RBP16.7■□□□□ 0.26
VIM-203ENST00000469543 IL2RAP01589 272 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 SERPINF1P36955 418 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 ARHGDIBP52566 201 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 ECH1Q13011 328 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 C1orf210Q8IVY1 113 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 OR5M9Q8NGP3 310 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 NECAB3Q96P71 396 aaPredicted RBP16.7■□□□□ 0.26
VIM-203ENST00000469543 TCFL5Q9UL49 500 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 TNFSF18Q9UNG2 199 aa16.7■□□□□ 0.26
VIM-203ENST00000469543 SNU13P55769 128 aaKnown RBP16.69■□□□□ 0.26
VIM-203ENST00000469543 CARD18P57730 90 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 NKAPLQ5M9Q1 402 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 GALNTL5Q7Z4T8 443 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 C20orf196Q8IYI0 205 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 ST8SIA2Q92186 375 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 MBD2Q9UBB5 411 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 FAM230AA0A1W2PPH8 454 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 IGLV3-1P01715 115 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 RPS27AP62979 156 aaKnown RBP16.69■□□□□ 0.26
VIM-203ENST00000469543 CSNK2A1P68400 391 aaPredicted RBP16.69■□□□□ 0.26
VIM-203ENST00000469543 PDCD1Q15116 288 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 GGNQ86UU5 652 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 ESX1Q8N693 406 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 ABHD3Q8WU67 409 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 C17orf50Q8WW18 174 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 ZNF701Q9NV72 531 aaPredicted RBP16.69■□□□□ 0.26
VIM-203ENST00000469543 DMXL1Q9Y485 3027 aa16.69■□□□□ 0.26
VIM-203ENST00000469543 HPNP05981 417 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 CTSSP25774 331 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 RGS19P49795 217 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 RRADP55042 308 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 ARPC4P59998 168 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 ZDHHC22Q8N966 263 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 OR56B1Q8NGI3 324 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 OR13G1Q8NGZ3 307 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 RHBDD1Q8TEB9 315 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 ZNF471Q9BX82 626 aaPredicted RBP16.68■□□□□ 0.26
VIM-203ENST00000469543 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
VIM-203ENST00000469543 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 FLVCR1Q9Y5Y0 555 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 AMY2BP19961 511 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 SUPT4H1P63272 117 aaKnown RBP16.68■□□□□ 0.26
VIM-203ENST00000469543 AADACL3Q5VUY0 350 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 OR2W3Q7Z3T1 314 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 SLC51BQ86UW2 128 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 GALNT11Q8NCW6 608 aa16.68■□□□□ 0.26
VIM-203ENST00000469543 DYRK2Q92630 601 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms