RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 CBY1Q9Y3M2 126 aa1.92□□□□□ -2.1
SOX2-OT-204ENST00000469278 LRRC42Q9Y546 428 aa1.92□□□□□ -2.1
SOX2-OT-204ENST00000469278 OR51B2Q9Y5P1 312 aa1.92□□□□□ -2.1
SOX2-OT-204ENST00000469278 C2orf16Q68DN1 1984 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 NEURL4Q96JN8 1562 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 AQRO60306 1485 aaKnown RBP eCLIP1.91□□□□□ -2.16e-18■■■■□ 26.1
SOX2-OT-204ENST00000469278 IGLV3-12A0A075B6K2 115 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TRAV8-4A0A0B4J246 113 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 A0A0J9YYE9 177 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 LRCOL1A6NCL2 159 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PLEKHA8P1O95397 391 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CSTAP01040 98 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 IGLV3-25P01717 112 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 P01737 135 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TRBC1P01850 177 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CD74P04233 296 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 DCNP07585 359 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RHOCP08134 193 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CCDC172P0C7W6 258 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 THRAP10827 490 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PRKACBP22694 351 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PSMB5P28074 263 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 LOXP28300 417 aaPredicted RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 DEKP35659 375 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PRLHRP49683 370 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PSMB2P49721 201 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 MTPNP58546 118 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TAS2R39P59534 338 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TAS2R60P59551 318 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RPL18AQ02543 176 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ADIGQ0VDE8 80 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ZNF816Q0VGE8 651 aaPredicted RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 PRSS8Q16651 343 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 HNRNPA1L2Q32P51 320 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 SLC25A35Q3KQZ1 300 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 C6orf99Q4VX62 202 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 C6orf183Q5T699 404 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CPTPQ5TA50 214 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RNF182Q8N6D2 247 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ZNF615Q8N8J6 731 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ASCC1Q8N9N2 400 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 OR4A15Q8NGL6 344 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 OR13C9Q8NGT0 318 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ZNF721Q8TF20 911 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 BAALCQ8WXS3 180 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 OR8D1Q8WZ84 308 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TFGQ92734 400 aaPredicted RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 KCNS1Q96KK3 526 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 ALS2CR12Q96Q35 445 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RTBDNQ9BSG5 229 aaPredicted RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 MARVELD1Q9BSK0 173 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CHCHD7Q9BUK0 85 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RSPO3Q9BXY4 272 aaPredicted RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 SAMD10Q9BYL1 202 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TM6SF2Q9BZW4 377 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 KIR3DX1Q9H7L2 352 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 VCX3AQ9NNX9 186 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TREX1Q9NSU2 369 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TMEM100Q9NV29 134 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 RAB23Q9ULC3 237 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 CFL2Q9Y281 166 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 FARSAQ9Y285 508 aaKnown RBP1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 SCN1AP35498 2009 aa1.91□□□□□ -2.1
SOX2-OT-204ENST00000469278 TSPOAP1O95153 1857 aa1.9□□□□□ -2.1
SOX2-OT-204ENST00000469278 TUBGCP6Q96RT7 1819 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 IGKV1-27A0A075B6S5 117 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 A0A0A6YYD5 115 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 IGHV3-72A0A0B4J1Y9 119 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 A0A0B4J2E0 115 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 ISPDA4D126 451 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 COLCA2A8K830 154 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 SEC14L6B5MCN3 397 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 PSPHP1O15172 72 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 SNAI1O95863 264 aaPredicted RBP1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 OXTP01178 125 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 CRYGCP07315 174 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 CD9P21926 228 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 IVDP26440 423 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 PMELP40967 661 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 INCA1Q0VD86 236 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 LAMTOR4Q0VGL1 99 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 MAPRE2Q15555 327 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 NKAIN1Q4KMZ8 207 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 DUPD1Q68J44 220 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 LINC00336Q6ZUF6 198 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 HMGN2P46Q86SG4 172 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 SLC7A5P1Q8MH63 180 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 FAM58AQ8N1B3 248 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 DRAM1Q8N682 238 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 OR1L1Q8NH94 360 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 SFXN5Q8TD22 340 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 TMEM234Q8WY98 164 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 SNF8Q96H20 258 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 TSNAXQ99598 290 aaKnown RBP1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 ZNF717Q9BY31 904 aaPredicted RBP1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 ARV1Q9H2C2 271 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 CSNK1G1Q9HCP0 422 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 HEBP1Q9NRV9 189 aa1.9□□□□□ -2.11
SOX2-OT-204ENST00000469278 RBFOX1Q9NWB1 397 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms