RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR2L13Q8N349 312 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 C11orf42Q8N5U0 333 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CELF5Q8N6W0 485 aaKnown RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LINC01465Q8N7H1 131 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZSCAN4Q8NAM6 433 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 OR4C5Q8NGB2 326 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 OR51A2Q8NGJ7 313 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 OR14C36Q8NHC7 312 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM170AQ8WVE7 144 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 DDIT4LQ96D03 193 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 EID2BQ96D98 161 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 GNPNAT1Q96EK6 184 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PELI1Q96FA3 418 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NEIL1Q96FI4 390 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SLC35G5Q96KT7 338 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 OR5B12Q96R08 314 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LYSMD1Q96S90 227 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MYADMQ96S97 322 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TXN2Q99757 166 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SMOQ99835 787 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PLA2G12AQ9BZM1 189 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MOB1AQ9H8S9 216 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ELL3Q9HB65 397 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PDFQ9HBH1 243 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 WFDC1Q9HC57 220 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 Q9N2J8 555 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 GSKIPQ9P0R6 139 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CKLFQ9UBR5 152 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CHRNA9Q9UGM1 479 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CRLS1Q9UJA2 301 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 FBXL7Q9UJT9 491 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NSG2Q9Y328 171 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 OR51B4Q9Y5P0 310 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM14AQ9Y6G1 99 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 COLEC10Q9Y6Z7 277 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CCDC88CQ9P219 2028 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MGAMO43451 1857 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PLXNA3P51805 1871 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NINQ8N4C6 2090 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SCN1AP35498 2009 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 DOCK4Q8N1I0 1966 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CUL9Q8IWT3 2517 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 A0A0C4DFX4 3053 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TRAV18A0A075B6X5 111 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TRAV1-1A0A0B4J248 108 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 IGHV2-70DA0A0C4DH43 119 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TSPAN11A1L157 253 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 XKRY2A2RUG3 117 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MAP1LC3B2A6NCE7 125 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ANTXRLA6NF34 631 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 EEF1E1-BLOC1S5C9J1V9 151 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C1QTNF3-AMACRE9PGA6 284 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 HMGN4O00479 90 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CCL22O00626 93 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SCDO00767 359 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 XKRYO14609 159 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 LDLRAD4O15165 306 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 LATO43561 262 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 GPR137BO60478 399 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR2J2O76002 312 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 STK17BO94768 372 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SFT2D2O95562 160 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 IL18BPO95998 194 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CATP04040 527 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 TYMSP04818 313 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR8U9P0C7N5 309 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 LIPCP11150 499 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 HMGA1P17096 107 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RPL12P30050 165 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SRP14P37108 136 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MPLP40238 635 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RPL29P47914 159 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 THBS3P49746 956 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 BLKP51451 505 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 PDX1P52945 283 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 LGALS4P56470 323 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 CLDN18P56856 261 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 OR12D2P58182 307 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 SP4Q02446 784 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 IL24Q13007 206 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ATXN7L3Q14CW9 347 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZXDCQ2QGD7 858 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 C18orf21Q32NC0 220 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-207ENST00000468925 BSXQ3C1V8 233 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 AMZ1Q400G9 498 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MPPE1Q53F39 396 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF506Q5JVG8 444 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 VAX1Q5SQQ9 334 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 FAM27D1Q5T7N8 215 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 MFSD14CQ5VZR4 134 aa4.31□□□□□ -1.72
SF3B1-207ENST00000468925 RTL6Q6ICC9 239 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms