RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PIGMQ9H3S5 423 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 POFUT1Q9H488 388 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 SLC7A11Q9UPY5 501 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 CACNA1AO00555 2505 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 TLN1Q9Y490 2541 aaKnown RBP16.38■□□□□ 0.21
SMC4-209ENST00000468653 CHD8Q9HCK8 2581 aa16.38■□□□□ 0.21
SMC4-209ENST00000468653 TRAV18A0A075B6X5 111 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 A0A0G2JNJ9 132 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 METTL21EPA6NDL7 271 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 EEF1E1-BLOC1S5C9J1V9 151 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 J3QW42 95 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 PLA2G10O15496 165 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 IGKV3-15P01624 115 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 UBBP0CG47 229 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 PTGFRP43088 359 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 MRPS10P82664 201 aaKnown RBP16.37■□□□□ 0.21
SMC4-209ENST00000468653 HACD4Q5VWC8 232 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 PLCXD3Q63HM9 321 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 MTFR2Q6P444 385 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 BIVMQ86UB2 503 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 UBASH3BQ8TF42 649 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 FAM46BQ96A09 425 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 BORCS8Q96FH0 119 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 TECTBQ96PL2 329 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 SLC22A4Q9H015 551 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 C11orf54Q9H0W9 315 aaPredicted RBP16.37■□□□□ 0.21
SMC4-209ENST00000468653 Q9UFV3 132 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 ING4Q9UNL4 249 aa16.37■□□□□ 0.21
SMC4-209ENST00000468653 GABARAPH6UMI1 98 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 SFTPCP11686 197 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 QRFPP83859 136 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 UNC119Q13432 240 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 OR2W3Q7Z3T1 314 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 FTMTQ8N4E7 242 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 CSNK2A3Q8NEV1 391 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 TNFAIP8L1Q8WVP5 186 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 FCAMRQ8WWV6 532 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 GCDHQ92947 438 aaPredicted RBP16.36■□□□□ 0.21
SMC4-209ENST00000468653 YIPF5Q969M3 257 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 S100A13Q99584 98 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 PAPOLGQ9BWT3 736 aaKnown RBP16.36■□□□□ 0.21
SMC4-209ENST00000468653 FBLN5Q9UBX5 448 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 ZNF629Q9UEG4 869 aaPredicted RBP16.36■□□□□ 0.21
SMC4-209ENST00000468653 ZNF850A8MQ14 1090 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 FAM157BP0CG42 384 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 SPNP16150 400 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 RBP2P50120 134 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 MZT2BQ6NZ67 158 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 LHFPL2Q6ZUX7 228 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 KRT74Q7RTS7 529 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 KCNG3Q8TAE7 436 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 AUNIPQ9H7T9 357 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 GHRLQ9UBU3 117 aa16.36■□□□□ 0.21
SMC4-209ENST00000468653 SPENQ96T58 3664 aaKnown RBP16.35■□□□□ 0.21
SMC4-209ENST00000468653 A0A0A6YYH2 397 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 A6NJ64 397 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 CD300LBA8K4G0 201 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 TMEM14DPA8MWL7 114 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 A8MXE2 369 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 SMPD2O60906 423 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 PTHLHP12272 177 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 PSMB1P20618 241 aaKnown RBP16.35■□□□□ 0.21
SMC4-209ENST00000468653 FUT6P51993 359 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 PPP1CBP62140 327 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 SPATA46Q5T0L3 261 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 CRIP3Q6Q6R5 217 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 CCBE1Q6UXH8 406 aaPredicted RBP16.35■□□□□ 0.21
SMC4-209ENST00000468653 NRARPQ7Z6K4 114 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 TOMM5Q8N4H5 51 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 ACBD4Q8NC06 268 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 OR52I2Q8NH67 350 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 S100PBPQ96BU1 408 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 WBP1Q96G27 269 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 SLC25A15Q9Y619 301 aa16.35■□□□□ 0.21
SMC4-209ENST00000468653 LYRM1O43325 122 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 SSX4O60224 188 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 ICMTO60725 284 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 MPIG6BO95866 241 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 TMEM225BP0DP42 221 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 RFX2P48378 723 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 ATP1B3P54709 279 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 CASP6P55212 293 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 PRDX4Q13162 271 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 SLC22A6Q4U2R8 563 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 TIMM23BQ5SRD1 257 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 RAB12Q6IQ22 244 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 NCCRP1Q6ZVX7 275 aaPredicted RBP16.34■□□□□ 0.21
SMC4-209ENST00000468653 MRGPRGQ86SM5 289 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 CCDC120Q96HB5 630 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 C1orf147Q96MC9 270 aaPredicted RBP16.34■□□□□ 0.21
SMC4-209ENST00000468653 ELL3Q9HB65 397 aaPredicted RBP16.34■□□□□ 0.21
SMC4-209ENST00000468653 MOV10Q9HCE1 1003 aaKnown RBP16.34■□□□□ 0.21
SMC4-209ENST00000468653 FAIMQ9NVQ4 179 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 GPR160Q9UJ42 338 aa16.34■□□□□ 0.21
SMC4-209ENST00000468653 CRTAPO75718 401 aaPredicted RBP16.33■□□□□ 0.21
SMC4-209ENST00000468653 CST4P01036 141 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 IGLV1-44P01699 117 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 CECR9P0C854 216 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 NAT2P11245 290 aa16.33■□□□□ 0.21
SMC4-209ENST00000468653 GDNFP39905 211 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms