RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NUAK2Q9H093 628 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 POLR2J3Q9H1A7 115 aaKnown RBP8.11□□□□□ -1.11
HDAC3-203ENST00000467533 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 LIN7BQ9HAP6 207 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 ZFP57Q9NU63 452 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 VNN3Q9NY84 501 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 SCOCQ9UIL1 159 aa8.11□□□□□ -1.11
HDAC3-203ENST00000467533 TRBV5-3A0A0A0MS03 114 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 IGLV1-36A0A0B4J1U3 117 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 HTR3EA5X5Y0 456 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 SOCS2O14508 198 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 SLC25A17O43808 307 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 PGA5P0DJD9 388 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 MYF6P23409 242 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 OR3A4PP47883 348 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 FHL1Q13642 323 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 ZNF260Q3ZCT1 412 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 PAGE3Q5JUK9 113 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 TMEM200BQ69YZ2 307 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 TMPRSS11FQ6ZWK6 438 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 NRMQ8IXM6 262 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 DPP10Q8N608 796 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 OR10Z1Q8NGY1 313 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 OR4Q3Q8NH05 313 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 RPL3LQ92901 407 aaKnown RBP8.1□□□□□ -1.11
HDAC3-203ENST00000467533 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 TLNRD1Q9H1K6 362 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 NMNAT1Q9HAN9 279 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-203ENST00000467533 PNRC2Q9NPJ4 139 aaKnown RBP8.1□□□□□ -1.11
HDAC3-203ENST00000467533 N6AMT1Q9Y5N5 214 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 LYVE1Q9Y5Y7 322 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 GMEB1Q9Y692 573 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 RYR1P21817 5038 aa8.1□□□□□ -1.11
HDAC3-203ENST00000467533 FAM90A22PA8MWA6 464 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 HCKP08631 526 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 GLRA1P23415 457 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 CD24P25063 80 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 DDOSTP39656 456 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 SLC7A2P52569 658 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 STX1BP61266 288 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 ZNF273Q14593 569 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 SEC23BQ15437 767 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 DEFB136Q30KP8 78 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 ZNF770Q6IQ21 691 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-203ENST00000467533 CCDC80Q76M96 950 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 ADCK1Q86TW2 530 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 SATL1Q86VE3 508 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 OR4M1Q8NGD0 313 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 SPDL1Q96EA4 605 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 TSSK2Q96PF2 358 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 CDRT15Q96T59 188 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 MICU1Q9BPX6 476 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 PAPOLGQ9BWT3 736 aaKnown RBP8.09□□□□□ -1.11
HDAC3-203ENST00000467533 LGALS13Q9UHV8 139 aa8.09□□□□□ -1.11
HDAC3-203ENST00000467533 IGKV1D-17A0A075B6S4 117 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 ANXA2P2A6NMY6 339 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 LDLRAD4O15165 306 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 XRCC2O43543 280 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR2F2O95006 317 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 SLC2A1P11166 492 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 PSG2P11465 335 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 PIPP12273 146 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-203ENST00000467533 CRABP1P29762 137 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 GPR4P46093 362 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR1E2P47887 323 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 MTPNP58546 118 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 IFFO1Q0D2I5 559 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 ST3GAL3Q11203 375 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 SLC36A3Q495N2 470 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 FAM27D1Q5T7N8 215 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 MINOS1Q5TGZ0 78 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 AGBL2Q5U5Z8 902 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 DRAM2Q6UX65 266 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 C16orf89Q6UX73 402 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 PTCHD4Q6ZW05 846 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 KCTD8Q6ZWB6 473 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 CYB561A3Q8NBI2 242 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR11H6Q8NGC7 330 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR2T27Q8NH04 317 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR8U1Q8NH10 309 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 GATAD1Q8WUU5 269 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 LZICQ8WZA0 190 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 OR52B2Q96RD2 323 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 RTL8AQ9BWD3 113 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 NSRP1Q9H0G5 558 aaKnown RBP8.08□□□□□ -1.12
HDAC3-203ENST00000467533 C1orf21Q9H246 121 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 PPP1R3EQ9H7J1 279 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 YY1AP1Q9H869 796 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 ZNF222Q9UK12 451 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 MINOS1-NBL1R4GNA1 71 aa8.08□□□□□ -1.12
HDAC3-203ENST00000467533 DCTN6O00399 190 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 TBX1O43435 398 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 HLA-DQA2P01906 255 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 IGHV1-8P0DP01 117 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 TROVE2P10155 538 aaKnown RBP eCLIP8.07□□□□□ -1.12
HDAC3-203ENST00000467533 SNRPBP14678 240 aaKnown RBP8.07□□□□□ -1.12
HDAC3-203ENST00000467533 IFNA8P32881 189 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 CRYBA2P53672 197 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 SLC35B1P78383 322 aa8.07□□□□□ -1.12
HDAC3-203ENST00000467533 PRKCDQ05655 676 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms