RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CLDN12P56749 244 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 MRPS6P82932 125 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 PWWP2BQ6NUJ5 590 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 SLC23A3Q6PIS1 610 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TMPRSS11FQ6ZWK6 438 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 RERGQ96A58 199 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 OR2A7Q96R45 310 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ABCG5Q9H222 651 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ALG9Q9H6U8 611 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 DHCR7Q9UBM7 475 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TMED7Q9Y3B3 224 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 KIAA0100Q14667 2235 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 LMO7DNF2Z398 122 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 BLOC1S5-TXNDC5H3BN57 136 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 PLPP3O14495 311 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 XRCC3O43542 346 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 MPZL2O60487 215 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 KHDRBS3O75525 346 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 SIX6O95475 246 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 GIPP09681 153 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ETFAP13804 333 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ZNF17P17021 662 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 HTR1FP30939 366 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 GPR1P46091 355 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 OC90Q02509 493 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TSNQ15631 228 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 CST9Q5W186 159 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.73□□□□□ -1.339e-8■■■□□ 15.8
SPTBN1-204ENST00000467371 DEFB128Q7Z7B8 93 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 C10orf111Q8N326 155 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 GPR26Q8NDV2 337 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 OR52P1PQ8NH57 321 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 LYPD6BQ8NI32 183 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 VOPP1Q96AW1 172 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 APH1AQ96BI3 265 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 VN1R3Q9BXE9 311 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TMPRSS5Q9H3S3 457 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 REEP1Q9H902 201 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 MIEF1Q9NQG6 463 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 STEAP1Q9UHE8 339 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 NEU3Q9UQ49 428 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ZSWIM8A7E2V4 1837 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 DNAH14Q0VDD8 3507 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 CHEK1O14757 476 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 CASKO14936 926 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ADCYAP1P18509 176 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 SRD5A2P31213 254 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 DAP3P51398 398 aaKnown RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 FUT6P51993 359 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 CTBP2P56545 445 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 EWSR1Q01844 656 aaKnown RBP eCLIP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 GABRA6Q16445 453 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TTLL9Q3SXZ7 439 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 PLK5Q496M5 336 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ZNF776Q68DI1 518 aaPredicted RBP6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 Q6ZSR9 355 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 TMUB2Q71RG4 321 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 NAA40Q86UY6 237 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 LINC01465Q8N7H1 131 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 SYNPRQ8TBG9 265 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 SMARCD1Q96GM5 515 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 OR6C1Q96RD1 312 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ISYNA1Q9NPH2 558 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 COMMD3Q9UBI1 195 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 AMDHD2Q9Y303 409 aa6.73□□□□□ -1.33
SPTBN1-204ENST00000467371 ZAR1LA6NP61 321 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 OR7A17O14581 309 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 B4GALT3O60512 393 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 TOXO94900 526 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ISG15P05161 165 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CTSLP07711 333 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 HIST1H1EP10412 219 aaKnown RBP6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CD1DP15813 335 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ZNF25P17030 456 aaPredicted RBP6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 FSTP19883 344 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CXCR1P25024 350 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 GDF1P27539 372 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 SLC10A7Q0GE19 358 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ZNF77Q15935 545 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ACTL10Q5JWF8 245 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 NSUN5P2Q63ZY6 315 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 LEMD1Q68G75 181 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 PAQR6Q6TCH4 344 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 LINGO2Q7L985 606 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ASCL5Q7RTU5 278 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 ASB17Q8WXJ9 295 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CTHRC1Q96CG8 243 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 DLL3Q9NYJ7 618 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 RASL12Q9NYN1 266 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 PARP14Q460N5 1801 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CEP290O15078 2479 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 LRP5LA4QPB2 252 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 F13BP05160 661 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 HLA-DQB2P05538 268 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 CTGFP29279 349 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 EXOSC7Q15024 291 aaKnown RBP6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 GSG1LQ6UXU4 331 aa6.72□□□□□ -1.33
SPTBN1-204ENST00000467371 LRRC28Q86X40 367 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms