RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 FZR1Q9UM11 496 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 SNX12Q9UMY4 172 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 WDR45Q9Y484 360 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 CACNG2Q9Y698 323 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 KCNE3Q9Y6H6 103 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 DOCK11Q5JSL3 2073 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
PTCD3-207ENST00000467273 MEX3AA1L020 520 aaKnown RBP4.47□□□□□ -1.69
PTCD3-207ENST00000467273 FAM90A8PA6NJQ4 464 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 RNASEK-C17orf49H0YIS7 233 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 H0YL77 283 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SLC28A1O00337 649 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MGRN1O60291 552 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SELENOFO60613 162 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 NPIPB7O75200 414 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SAP30O75446 220 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV1-46P01743 117 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 LCKP06239 509 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 WNT2P09544 360 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SBK2P0C263 348 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 FAM90A13PP0C7W8 464 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 FAM90A24PP0C7X0 464 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 TCP1P17987 556 aaKnown RBP4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SDC1P18827 310 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 CRATP43155 626 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 IER3P46695 156 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SERPINB9P50453 376 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MMP15P51511 669 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 RBBP4Q09028 425 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 DGCR6Q14129 220 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MAPK14Q16539 360 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SGCAQ16586 387 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 TBC1D28Q2M2D7 210 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ALKBH6Q3KRA9 238 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 C1orf140Q5VVS0 124 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 DHRS7BQ6IAN0 325 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ANKRD26P1Q6NSI1 321 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF774Q6NX45 483 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 C5orf46Q6UWT4 87 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 BRD3OSQ6XYD6 125 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 GLDNQ6ZMI3 551 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF788Q6ZQV5 615 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 DCXRQ7Z4W1 244 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 VTCN1Q7Z7D3 282 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 SLC30A7Q8NEW0 376 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 LRRC20Q8TCA0 184 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 CAPSLQ8WWF8 208 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MCUR1Q96AQ8 359 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 CCDC126Q96EE4 140 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 NEURL3Q96EH8 262 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 CEP19Q96LK0 163 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 PRRC1Q96M27 445 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MAGEB18Q96M61 343 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 OR2M2Q96R28 347 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 CGREF1Q99674 301 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 LRMDAQ9H2I8 198 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 C12orf10Q9HB07 376 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 TMEM106BQ9NUM4 274 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ACOXLQ9NUZ1 547 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 NKIRAS1Q9NYS0 192 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 ZNF224Q9NZL3 707 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 KIAA1456Q9P272 454 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 MIOXQ9UGB7 285 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 DCDC2Q9UHG0 476 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 POFUT2Q9Y2G5 429 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 USH1CQ9Y6N9 552 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 TENM2Q9NT68 2774 aa4.47□□□□□ -1.69
PTCD3-207ENST00000467273 IGHV3OR16-10A0A075B7F0 116 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF816-ZNF321PA0A0X1KG74 233 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 FAM240BA0A1B0GVZ2 78 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ANKRD61A6NGH8 418 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TRPC5OSA6NMA1 111 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 CEACAM18A8MTB9 384 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TMEM114B3SHH9 223 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 FTCDNL1E5RQL4 147 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 K7EIL1 84 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 P2RY10O00398 339 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PHYHO14832 338 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 AIM2O14862 343 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SURF4O15260 269 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 IDH3BO43837 385 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 OR2T1O43869 369 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SCN2BO60939 215 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 NDUFS6O75380 124 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 LYPLA1O75608 230 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 CCNB2O95067 398 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 AHSA1O95433 338 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 OR12D1P0DN82 309 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PNMTP11086 282 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 EDN2P20800 178 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 GTF2E2P29084 291 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PHBP35232 272 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 FHITP49789 147 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 P2RX3P56373 397 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SEC61A1P61619 476 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 GNB2P62879 340 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 C1DQ13901 141 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SPCS2Q15005 226 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 MAPK11Q15759 364 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SNAPC1Q16533 368 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms