RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZFP1Q6P2D0 407 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 ZCCHC24Q8N2G6 241 aaKnown RBP2.55□□□□□ -2
VPS13A-209ENST00000467124 SYS1Q8N2H4 156 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 SPERTQ8NA61 448 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 GATSQ8NAP1 163 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 OR6N2Q8NGY6 317 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 OR8K3Q8NH51 312 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 STARD4Q96DR4 205 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 L3HYPDHQ96EM0 354 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 C19orf60Q96EN9 201 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 NARS2Q96I59 477 aaKnown RBP2.55□□□□□ -2
VPS13A-209ENST00000467124 CPB2Q96IY4 423 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 NUDT9Q9BW91 350 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 DDIT4Q9NX09 232 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 CFAP45Q9UL16 551 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 POFUT2Q9Y2G5 429 aa2.55□□□□□ -2
VPS13A-209ENST00000467124 PCM1Q15154 2024 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 JCADQ9P266 1359 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TRAV8-4A0A0B4J246 113 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 IGHV2OR16-5A0A0B4J2B6 119 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 ZNF879B4DU55 563 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 J3QT63 122 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 POLR1CO15160 346 aaPredicted RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 SOCS1O15524 211 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 ZNF207O43670 478 aaKnown RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 ALOX12BO75342 701 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 IGKV1D-16P01601 117 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 P01737 135 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 SLC35G6P0C7Q6 338 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 HSPD1P10809 573 aaKnown RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 AZU1P20160 251 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 NPY1RP25929 384 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 RANBP1P43487 201 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 CMC4P56277 68 aaPredicted RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 TAS2R60P59551 318 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 IFITM3Q01628 133 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 PPIDQ08752 370 aaKnown RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 NAB1Q13506 487 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 UBE2SQ16763 222 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 STEAP4Q687X5 459 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TMPRSS11AQ6ZMR5 421 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 SLC7A5P1Q8MH63 180 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 DRAM1Q8N682 238 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 LILRB4Q8NHJ6 448 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 CPNE4Q96A23 557 aaPredicted RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 ZNF75AQ96N20 296 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TEAD3Q99594 435 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TSNAXQ99598 290 aaKnown RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 SULT4A1Q9BR01 284 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 COPS4Q9BT78 406 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TREM1Q9NP99 234 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 SIRT7Q9NRC8 400 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 SDHAF2Q9NX18 166 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 NXT1Q9UKK6 140 aaKnown RBP2.54□□□□□ -2
VPS13A-209ENST00000467124 RAB23Q9ULC3 237 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 WIF1Q9Y5W5 379 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 TSPOAP1O95153 1857 aa2.54□□□□□ -2
VPS13A-209ENST00000467124 COL16A1Q07092 1604 aaPredicted RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 ZNF608Q9ULD9 1512 aaPredicted RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 AQRO60306 1485 aaKnown RBP eCLIP2.53□□□□□ -2
VPS13A-209ENST00000467124 IGKV2D-24A0A075B6R9 120 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 TRAV8-6A0A0B4J262 113 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 ANKRD20A5PA0PJZ0 165 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 BPY2O14599 106 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 EIF1BO60739 113 aaKnown RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 VAPBO95292 243 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 HLA-DQA1P01909 254 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 APOA1P02647 267 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 MT-ND4P03905 459 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 MRPL3P09001 348 aaKnown RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 LINC00869P0C866 280 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 PRKACBP22694 351 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 ME2P23368 584 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 OPRK1P41145 380 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 EIF1P41567 113 aaKnown RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 PITPNAQ00169 270 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 C2orf80Q0P641 193 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 EBI3Q14213 229 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 C18orf21Q32NC0 220 aaPredicted RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 SLC25A35Q3KQZ1 300 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 DEGS2Q6QHC5 323 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 SAXO1Q8IYX7 474 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 ST13P4Q8IZP2 240 aaPredicted RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 LINC00469Q8N7U9 141 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 OR5T1Q8NG75 326 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 OR2L8Q8NGY9 312 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 OR13G1Q8NGZ3 307 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 UBALD1Q8TB05 177 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 LINC01560Q8TB33 94 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 FRZBQ92765 325 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 CIDECQ96AQ7 238 aaPredicted RBP2.53□□□□□ -2
VPS13A-209ENST00000467124 ALS2CR12Q96Q35 445 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 MARVELD1Q9BSK0 173 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 RSG1Q9BU20 258 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 SYT4Q9H2B2 425 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 C6orf50Q9HD87 102 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 HEBP1Q9NRV9 189 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 TREX1Q9NSU2 369 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms