RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PLATP00750 562 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 C1QBP02746 253 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 RLN1P04808 185 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 CD79AP11912 226 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 CPN1P15169 458 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 SERPINA2P20848 420 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 ZP1P60852 638 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
UBE4B-206ENST00000466379 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
UBE4B-206ENST00000466379 IGF2-ASQ6U949 168 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 GLDNQ6ZMI3 551 aaPredicted RBP11.78□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF584Q8IVC4 421 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 NAXEQ8NCW5 288 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 RNF122Q9H9V4 155 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF69Q9UC07 566 aa11.78□□□□□ -0.52
UBE4B-206ENST00000466379 TNRC6AQ8NDV7 1962 aaKnown RBP11.78□□□□□ -0.52
UBE4B-206ENST00000466379 PRSS47A8MTI9 375 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF736B4DX44 427 aaPredicted RBP11.77□□□□□ -0.52
UBE4B-206ENST00000466379 CDK2AP1O14519 115 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 ATP6V1G1O75348 118 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 AMY2AP04746 511 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 AGTR1P30556 359 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 GZMKP49863 264 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 RIPPLY1Q0D2K3 151 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 CAMK2BQ13554 666 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 NKPD1Q17RQ9 610 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 Q5BKY6 102 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 FGD2Q7Z6J4 655 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 KCNK7Q9Y2U2 307 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 FRYQ5TBA9 3013 aa11.77□□□□□ -0.52
UBE4B-206ENST00000466379 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 RAD51DO75771 328 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 GSK3AP49840 483 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 TMEM50BP56557 158 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 FAM3AP98173 230 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 IGFL2Q6UWQ7 119 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 CD163Q86VB7 1156 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 OR51T1Q8NGJ9 327 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 RAB3CQ96E17 227 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
UBE4B-206ENST00000466379 FAM186AA6NE01 2351 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 C5orf49A4QMS7 147 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 SPRY1O43609 319 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-206ENST00000466379 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 PRAF2O60831 178 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 MELTFP08582 738 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 ZNF735P0CB33 412 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 MTCP1P56278 107 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 CDK10Q15131 360 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 HIKESHIQ53FT3 197 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 DEDD2Q8WXF8 326 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 C10orf35Q96D05 121 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 LAMA5O15230 3695 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 DOCK7Q96N67 2140 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 OR6C65A6NJZ3 312 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 ZNF891A8MT65 544 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-206ENST00000466379 EFSO43281 561 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 CHRM2P08172 466 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 UBBP0CG47 229 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 ANXA3P12429 323 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 MGMTP16455 207 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 UBE2MP61081 183 aaKnown RBP11.76□□□□□ -0.53
UBE4B-206ENST00000466379 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
UBE4B-206ENST00000466379 RPS27AP62979 156 aaKnown RBP11.76□□□□□ -0.53
UBE4B-206ENST00000466379 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 IDO2Q6ZQW0 420 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 P4HA3Q7Z4N8 544 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 BPIFB2Q8N4F0 458 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 CCDC54Q8NEL0 328 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 S100A13Q99584 98 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 TMEM246Q9BRR3 403 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 IFT46Q9NQC8 304 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
UBE4B-206ENST00000466379 MEIKINA0A087WXM9 373 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 SCGNO76038 276 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 ALX3O95076 343 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 CD74P04233 296 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 TMEM225BP0DP42 221 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 HIST1H1DP16402 221 aaKnown RBP11.75□□□□□ -0.53
UBE4B-206ENST00000466379 GNG2P59768 71 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 RAB1AP62820 205 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 ASCL5Q7RTU5 278 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 SLC36A1Q7Z2H8 476 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 GCNT2Q8N0V5 402 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 OR5M9Q8NGP3 310 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 PIGCQ92535 297 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 URM1Q9BTM9 101 aaKnown RBP11.75□□□□□ -0.53
UBE4B-206ENST00000466379 CHIAQ9BZP6 476 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 CST11Q9H112 138 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
UBE4B-206ENST00000466379 AKAP13Q12802 2813 aa11.75□□□□□ -0.53
UBE4B-206ENST00000466379 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms