RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF850A8MQ14 1090 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 NPFFO15130 113 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 GSTT1P30711 240 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 SAA4P35542 130 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 DDOSTP39656 456 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 RPL15P61313 204 aaKnown RBP16.86■□□□□ 0.29
COL6A1-203ENST00000466285 MICAQ29983 383 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 HCP5Q6MZN7 132 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 TMEM179BQ7Z7N9 219 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 OTULINQ96BN8 352 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 RAB3IPQ96QF0 476 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-203ENST00000466285 ZNF391Q9UJN7 358 aa16.86■□□□□ 0.29
COL6A1-203ENST00000466285 RIIAD1A6NNX1 92 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 RHBDL1O75783 438 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 DCTDP32321 178 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 GNGT1P63211 74 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 EGR3Q06889 387 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 DHRS7BQ6IAN0 325 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-203ENST00000466285 OR2T5Q6IEZ7 315 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 METAP1DQ6UB28 335 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-203ENST00000466285 C16orf89Q6UX73 402 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 BBS1Q8NFJ9 593 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 OR10G2Q8NGC3 310 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 OR8B12Q8NGG6 310 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 OR2T29Q8NH02 315 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 ANGPTL6Q8NI99 470 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 FAM110DQ8TAY7 271 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-203ENST00000466285 PGAM5Q96HS1 289 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 AJUBAQ96IF1 538 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 TCF7L1Q9HCS4 588 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 HAO2Q9NYQ3 351 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 BAIAP2Q9UQB8 552 aa16.85■□□□□ 0.29
COL6A1-203ENST00000466285 PRR32B1ATL7 298 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 TIMM23O14925 209 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 NDUFB3O43676 98 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 GLCEO94923 617 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 ZNF3P17036 446 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 GRK5P34947 590 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 NAA10P41227 235 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-203ENST00000466285 SLC15A1P46059 708 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 MZT1Q08AG7 82 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 LCN8Q6JVE9 175 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 ZNF788Q6ZQV5 615 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 SLC36A1Q7Z2H8 476 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 GALNT4Q8N4A0 578 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 C8orf46Q8TAG6 207 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 OR5P3Q8WZ94 311 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 OR10A2Q9H208 303 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 OR51V1Q9H2C8 321 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 TOR3AQ9H497 397 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 C16orf95Q9H693 158 aa16.84■□□□□ 0.29
COL6A1-203ENST00000466285 ZNF816-ZNF321PA0A0X1KG74 233 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 IFNGP01579 166 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 FBP1P09467 338 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 GNALP38405 381 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 HCCSP53701 268 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 ATPAF1Q5TC12 328 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-203ENST00000466285 PLBD1Q6P4A8 553 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 GDPGP1Q6ZNW5 385 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 HS3ST5Q8IZT8 346 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 PPP1R35Q8TAP8 253 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 RORBQ92753 470 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 UBE2FQ969M7 185 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 REEP1Q9H902 201 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 FAM96BQ9Y3D0 163 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 DNAH3Q8TD57 4116 aa16.83■□□□□ 0.28
COL6A1-203ENST00000466285 IGKV1D-17A0A075B6S4 117 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 MEIOCA2RUB1 952 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 TIPRLO75663 272 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 H2BFMP0C1H6 154 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 C11orf91Q3C1V1 193 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 PIGWQ7Z7B1 504 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 OR52H1Q8NGJ2 320 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 TEX47Q8TBZ9 253 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 PIGCQ92535 297 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 C12orf43Q96C57 262 aaKnown RBP16.82■□□□□ 0.28
COL6A1-203ENST00000466285 CLPTM1LQ96KA5 538 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 FEVQ99581 238 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 MICU1Q9BPX6 476 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 RTL8AQ9BWD3 113 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 PPA2Q9H2U2 334 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 DPAGT1Q9H3H5 408 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 MAGIXQ9H6Y5 334 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 SP140LQ9H930 580 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 SLC25A10Q9UBX3 287 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-203ENST00000466285 ZNF222Q9UK12 451 aa16.82■□□□□ 0.28
COL6A1-203ENST00000466285 TSPAN9O75954 239 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 PSMA6P60900 246 aaKnown RBP16.81■□□□□ 0.28
COL6A1-203ENST00000466285 LRRC10Q5BKY1 277 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 KCTD8Q6ZWB6 473 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 CSNK2A3Q8NEV1 391 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 OTOSQ8NHW6 89 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 TTTY10Q9BZA0 68 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 ARL2BPQ9Y2Y0 163 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 LRP12Q9Y561 859 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 MAB21L2Q9Y586 359 aa16.81■□□□□ 0.28
COL6A1-203ENST00000466285 A0A0G2JK05 382 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 NKX6-3A6NJ46 265 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 ANXA2P2A6NMY6 339 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms